LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre1g03867	ATGTGTGTACCAATTTTGTTGAATGCGCAAAGCAACAAAGATGAATCTTTCATATTAGGGTGTGGCTTAGGTGATAATGGTGGCAAAGATTCAGATGGAAGACAATGGATTCCAGATAACAAATATGTATCAGGTGGAAATTCAGTAACAGCAAAAGCTTCATTTCAAGATCCTTCACTTTTATCAGAAATTCCATATATGACAGCAAGAATTTTCACATCTGAAACAACCTACAAATTGCCGATTCTACCCGATAAACGTTATTGGTTAAGACTTCATTTTTATCCTTCTGTTTACAACAATTTCAACCCAGCAGATTCATATTTCTCTGTAACAGCAAATGGTGTTACACTTCTCAATAATTTCAGCTCCTCAATTACATGTCAAGCCTTATCACAAGCTTATATTGATAGAGAATATTCATTTGCACCTTTGAATTCGGATGTTCTTGAACTTACATTCAAACCTTCTGATAAACACAATGGTGCTTTTGCTTTTGTTAATGGTATTCAGCTTATTCAAATGCCGGATTTGCTATTTGATTCTCCTTCGTTGGTCGGTTATCCAGACCAAACTGTGGATGCTAAAAGTATGCATATGCAAACCATGTTTAGATTAAATGTTGGTGGACAATATATATCTCCGGTTCATGATTCTGGTTTGAGTCGAACATGGTACGATGATACACCTTACATTTATGGTGCAGCCGTCGGTGTTACACACCAAGCTGAGAAGAATGTTACAATTGACTATCAAACAATGCCTAAATACATTGCTCCTGCCGATGTTTATTCAAGTTCAAGATCCATGGGAACTAATAAAGATGTCAACATGGGATACAATCTCACATGGATTTTTCAAGTTGATCCAAATTCTATGTACCTTACAAGATTACATTTCTGTGATTACCATTATTTACAATCAAACGAGATTGTTTTCAGTATCTTTGTTAACAATCAAACAGCGCAGGATCAAGCCGATGTAATTGGTTGGACAGGAAGACGAGTGACAACTTATAAGGATTATGTTGTTTATGTTCATGAAGAGGCGGGTGCTGATCAACTTTGGCTTGCATTGCATCCAAATCCCAATACAATGCCAAGATTTTACGATGCTATGCTTAATGGTGTTGAGATATTCAAACTCAATGATACTGATTTTTCTGGACCAAATCCTCAACCTTCTAATATGATGATGGAGTATGAGGAGAAGATAAGAAACTTCGAAGACAAAAATAGTCATAGTAAGAGTTTTGCTATTGGTGGAGCTGCCGGAGGTGCTGCAGGTTTTGCATTAGTTGCTGCAATATGTATTGTTGTTCATCAAAGGAAGAAGAGAACACCAGGTTCATACACAAACACTACATCAAGTTGGTTACCTCTCTATGGAAATTCACACACAACCGGAACAAAATCCACAATATCAGGAAAAAGCACGATGGGTAGTGGTGCAAAGTTAGCCATGGCTGAAGGACTATGTCGATATTTCTCTTTACAAGAGATGAGGCAAGCAACCAATAATTTTGAAGAGTCTAATGTTATTGGTGTAGGAGGATTTGGAAAAGTTTACAAGGGTGTTATTGATAATGGTTTTAAAGTGGCTATTAAGAGATCAAATCCACAATCAGAACAAGGAGTGAATGAATTTCAGACGGAAATTGAGATGCTTTCAAAGCTTAGACATAAACATTTGGTGTCTTTAATTGGTTTTTGTGAGGAAGATGAGGAAATGTGTTTAGTTTATGATTACATGGCCCATGGAACCATGAGGGAGCATTTATACAAAGGAAACAAACCAATAGATACATTATCATGGAAACAAAGGTTAGAGATTTGTATCGGTGCCGCAAGAGGTCTTCATTACCTTCACACAGGAGCAAAGTACACTATAATTCATAGAGATGTCAAAACAACCAACATTTTGCTTGATGAAAATTTGGTTGCCAAGGTTTCAGATTTTGGTTTGTCAAAAACAGGTCCAAATATGAACCAGGGTCATGTTAGTACAGTGGTAAAAGGAAGTTTTGGTTATTTGGATCCTGAATATTTCAGGAGACAACAATTGACTGAAAAATCCGATGTTTACTCTTTTGGGGTTGTTCTATTCGAGGCACTGTGTTCAAGACCTGCTTTAAATCCTAGTCTTCCAAAGGAACAAGTTAGTCTTGCAGATTGGGCTTTGATCAACAAAAGAAAAGGAACATTAGAGGATATTATTGATCCAAATCTCAAAGGAAAAATCAAACCTGAAAGCTTGAAGAAATTTGCAGATACAGCTGAAAAGTGTTTGTCGGATTCTGGACTTGATCGTCCCTCGATGAATGATCTATTGTGGAATCTTGAATTTGCTCTCAACTTACAAGAAAACGATGGTACTTCAAGTTCAACTCATAACAACTCTACACATTTTGATGAGAGTGAATTTGAAGAGGTGAGTTTGGCACACAATAATAACATGGCAGCACATTACAAAAACCTTAGCCTTGGAAGTGAACATGACCTTAGTCATGACACAACTGAGAATTCTTCTGACATTTTCTCTCAAATTGTCAATCCGAAAGGGCGATGA	2568	0.3688	MCVPILLNAQSNKDESFILGCGLGDNGGKDSDGRQWIPDNKYVSGGNSVTAKASFQDPSLLSEIPYMTARIFTSETTYKLPILPDKRYWLRLHFYPSVYNNFNPADSYFSVTANGVTLLNNFSSSITCQALSQAYIDREYSFAPLNSDVLELTFKPSDKHNGAFAFVNGIQLIQMPDLLFDSPSLVGYPDQTVDAKSMHMQTMFRLNVGGQYISPVHDSGLSRTWYDDTPYIYGAAVGVTHQAEKNVTIDYQTMPKYIAPADVYSSSRSMGTNKDVNMGYNLTWIFQVDPNSMYLTRLHFCDYHYLQSNEIVFSIFVNNQTAQDQADVIGWTGRRVTTYKDYVVYVHEEAGADQLWLALHPNPNTMPRFYDAMLNGVEIFKLNDTDFSGPNPQPSNMMMEYEEKIRNFEDKNSHSKSFAIGGAAGGAAGFALVAAICIVVHQRKKRTPGSYTNTTSSWLPLYGNSHTTGTKSTISGKSTMGSGAKLAMAEGLCRYFSLQEMRQATNNFEESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDEEMCLVYDYMAHGTMREHLYKGNKPIDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENLVAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCSRPALNPSLPKEQVSLADWALINKRKGTLEDIIDPNLKGKIKPESLKKFADTAEKCLSDSGLDRPSMNDLLWNLEFALNLQENDGTSSSTHNNSTHFDESEFEEVSLAHNNNMAAHYKNLSLGSEHDLSHDTTENSSDIFSQIVNPKGR	855

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre1g03867	855	FunFam	Receptor-like protein kinase FERONIA	584	801	-	-
	Trre1g03867	855	MobiDBLite	consensus disorder prediction	789	808	-	-
	Trre1g03867	855	ProSiteProfiles	Protein kinase domain profile.	508	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre1g03867	855	Gene3D	-	198	383	-	-
	Trre1g03867	855	Gene3D	-	19	176	-	-
	Trre1g03867	855	Pfam	Malectin-like domain	20	381	IPR024788	-
	Trre1g03867	855	Gene3D	Phosphorylase Kinase; domain 1	470	583	-	-
	Trre1g03867	855	SUPERFAMILY	Protein kinase-like (PK-like)	489	783	IPR011009	-
	Trre1g03867	855	FunFam	FERONIA receptor-like kinase	198	383	-	-
	Trre1g03867	855	FunFam	receptor-like protein kinase FERONIA	470	583	-	-
	Trre1g03867	855	FunFam	FERONIA receptor-like kinase	16	176	-	-
	Trre1g03867	855	MobiDBLite	consensus disorder prediction	833	855	-	-
	Trre1g03867	855	Pfam	Protein tyrosine and serine/threonine kinase	511	777	IPR001245	GO:0004672\|GO:0006468
	Trre1g03867	855	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	630	642	IPR008271	GO:0004672\|GO:0006468
	Trre1g03867	855	SMART	serkin_6	508	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre1g03867	855	CDD	STKc_IRAK	514	781	-	-
	Trre1g03867	855	PANTHER	OS07G0166700 PROTEIN	493	787	IPR045272	GO:0004714\|GO:0006468
	Trre1g03867	855	ProSitePatterns	Protein kinases ATP-binding region signature.	514	536	IPR017441	GO:0005524
	Trre1g03867	855	Gene3D	Transferase(Phosphotransferase) domain 1	584	808	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre1g03867	Trre-Chr1	42226112	42228893	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre1g03867	15	855	Receptor kinase-like Gene Family	AT3G51550	52.975	0.0	851

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Trre1g03867		Malectin_like	6.3e-38	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre1g03867	-		-	gmx:100791236	1339.32