Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03782 ATGTCAGCGGCGATGAGAAGATGCTTCCATACGGACTTCGAGTCAACGGATGGCATAAAGACGATTACAACTTTCGAGGAGATGGGATTCAAACACTTACTCCGTGGAATATACCGATTCGGTTTCGATAAACCATCACCGATTCAACAGCGTGCTGTTGTGCCTATCATTCAGGGTCGTGATGTCATCGCTCAGGCTCAATCTGGTACTGGCAAGACATCCATGATTGCTCTAACTGTTTGCCAGCTTGTCGATACCTCCGTCAGAGAGATCATGGCTCTAAAGTGGCGGATTAGAAATCCTTTTGGCATCGGCCTCTGGAGCAAATGGCAACTCGTCGTTCGTAATATTACCGATTGGGATGATGAAGTTGTTGTTGGACAAAGTAGTGCTGGGGTTTCGTCGATTATGGATACCTATATTCGGGAAATAACTTAA 438 0.4589 MSAAMRRCFHTDFESTDGIKTITTFEEMGFKHLLRGIYRFGFDKPSPIQQRAVVPIIQGRDVIAQAQSGTGKTSMIALTVCQLVDTSVREIMALKWRIRNPFGIGLWSKWQLVVRNITDWDDEVVVGQSSAGVSSIMDTYIREIT 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03782 145 Gene3D - 2 104 IPR027417 -
Trre1g03782 145 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 24 86 - -
Trre1g03782 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 92 IPR027417 -
Trre1g03782 145 Pfam DEAD/DEAH box helicase 47 84 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03782 Trre-Chr1 36589240 36591670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03782 13 94 Eukaryotic Initiation Factors Gene Family AT3G19760 73.494 2.33e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03782 K13025 - gmx:100795032 134.035