Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre1g03782 | ATGTCAGCGGCGATGAGAAGATGCTTCCATACGGACTTCGAGTCAACGGATGGCATAAAGACGATTACAACTTTCGAGGAGATGGGATTCAAACACTTACTCCGTGGAATATACCGATTCGGTTTCGATAAACCATCACCGATTCAACAGCGTGCTGTTGTGCCTATCATTCAGGGTCGTGATGTCATCGCTCAGGCTCAATCTGGTACTGGCAAGACATCCATGATTGCTCTAACTGTTTGCCAGCTTGTCGATACCTCCGTCAGAGAGATCATGGCTCTAAAGTGGCGGATTAGAAATCCTTTTGGCATCGGCCTCTGGAGCAAATGGCAACTCGTCGTTCGTAATATTACCGATTGGGATGATGAAGTTGTTGTTGGACAAAGTAGTGCTGGGGTTTCGTCGATTATGGATACCTATATTCGGGAAATAACTTAA | 438 | 0.4589 | MSAAMRRCFHTDFESTDGIKTITTFEEMGFKHLLRGIYRFGFDKPSPIQQRAVVPIIQGRDVIAQAQSGTGKTSMIALTVCQLVDTSVREIMALKWRIRNPFGIGLWSKWQLVVRNITDWDDEVVVGQSSAGVSSIMDTYIREIT | 145 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre1g03782 | 145 | Gene3D | - | 2 | 104 | IPR027417 | - | |
Trre1g03782 | 145 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | 24 | 86 | - | - | |
Trre1g03782 | 145 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 16 | 92 | IPR027417 | - | |
Trre1g03782 | 145 | Pfam | DEAD/DEAH box helicase | 47 | 84 | IPR011545 | GO:0003676|GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre1g03782 | Trre-Chr1 | 36589240 | 36591670 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre1g03782 | 13 | 94 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 73.494 | 2.33e-37 | 129 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre1g03782 | K13025 | - | gmx:100795032 | 134.035 |