Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03771 ATGATGTCTACTGCTCGAAGCATAATGAATTTTGTTGCTCAAGCTGCTGATGATTACGATATCACAGCCAACACGGACACTCTATCTAATTTAACAGAAATACATCCCACTGTCCAATCTTACTCCATCATGACAAAAACCTGCTTTGTCGAATTTGATCCAATGAATCCCAGAGCAAAGTTGCCAGCATGTTTGGCAAGGGATATTGGTCCGTACCTCAACAACTATGTCATATTAGAGGATCCAAACAAAAATCAAATTGAAATCTCTGTTGAAAAAAGGAATTCAAAGATATATTTCGCTCACGGCTGGACCCGTTTAAGGCACTTCTACCGCCTTAACCCAGGGGCTTGGATCACTCTTCTATACATGAATCCTGCTCTTTTCAAGATAAAAGTTTGGAGAATAACTGGAGCTGAGGTAACATATCCTAAAACAGATCCCCCACAGAAGCTACTGTTACCTAAACAACACAATCAGTGTTTCCCAAGCAGACCAGTAACTTACTTTGTATCTCCATCAAGGTTTATCCATACACTTGAAAAAACTCTGGATCCTTCTGATGTGGGATCAGGCATCCTGAAACTCTATTGGGATGGATTTTGCAAGCTCGCACTACCCAACGAAAATACTAATCTCACAATAGTGGACTGGCTAGGATATTCCTGGGACTGTCTTCTTGAAATCGAAGGACCTTCGCCTCAAACCTGCAACATTTCTGGCCAATGGCGCAATATGTGCAGAGCACATAGGTTATCCGATGGCATCACTCTCAAATTTGGTGTCACTGAACATTCAAACAATAGTGTAGTATATCTAAAGATATCTCCTTTCATAGGCCTCCGAACCACTTTAATTGCACCCACGAACTCGGAGACACATAAGGCTTTCTACCAAGCTGAATATTACTTCATGTTATAG 921 0.4115 MMSTARSIMNFVAQAADDYDITANTDTLSNLTEIHPTVQSYSIMTKTCFVEFDPMNPRAKLPACLARDIGPYLNNYVILEDPNKNQIEISVEKRNSKIYFAHGWTRLRHFYRLNPGAWITLLYMNPALFKIKVWRITGAEVTYPKTDPPQKLLLPKQHNQCFPSRPVTYFVSPSRFIHTLEKTLDPSDVGSGILKLYWDGFCKLALPNENTNLTIVDWLGYSWDCLLEIEGPSPQTCNISGQWRNMCRAHRLSDGITLKFGVTEHSNNSVVYLKISPFIGLRTTLIAPTNSETHKAFYQAEYYFML 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03771 306 Gene3D - 170 278 IPR015300 -
Trre1g03771 306 SUPERFAMILY DNA-binding pseudobarrel domain 178 273 IPR015300 -
Trre1g03771 306 SUPERFAMILY DNA-binding pseudobarrel domain 57 137 IPR015300 -
Trre1g03771 306 Gene3D - 43 138 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03771 Trre-Chr1 36475388 36476974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03771 60 147 B3 DNA Binding Superfamily AT1G49475 25.000 1.27e-07 49.3