Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03766 ATGCCAATAATATTCTTTTTAATCTTTAAGTTTTGGGAAGGACCTGTTCTTCAAGGAGAGCCAGAAGTTGAGTATCGTGGAATATCTGGCCAAGTTTCAAGTGTGCAATTAAGGGATGATCTTTTGTCAATGTTAGTCGCTGGTCATGAGACCACCGGTTCAGTGCTGACTTGGACGCTTTATCTTCTAAGTAAGGATCCTTCCTCATTGGCAAAAGCACAAGAAGAGATAGACAGAGTTTTACAGGGAAGGCGTCCTTCTTATGAAGATATTAAAGATCTTAAGTTCTTGAATCGCTGTATTATCGAGTCACTCCGACTTTATCCAAATCCTCCTGTATTGATAAGAAGATCTCAAATTCCTGATGAACTTCCGGGTGATTACAAAATCAATGCTGGTCAAGATATTATGATTTCTGTGTACAACATTCATCATTCTTCTAAGGTTTGGGATAGAGCCGAAGAGTTTTTGCCGGATAGATTTGATTTGAATGGTCCAGTGCCAAATGAAACAAATACAGATTTCAGATTCATTCCATTTAGCGGAGGGCCACGAAAGTGTGTTGGTGATCAGTTTGCGTTATTGGAAGCTACCGTTGCTCTTGGGGTCTTTCTACAGCACATGAACTTTGAGCTGGTCCCTGATCAAAATATCAGCATGACTACTGGTGCAACAATACATACAACAAATGGCTTGTACATGAAACTTAGCAGACGGTTGAAATAG 726 0.3994 MPIIFFLIFKFWEGPVLQGEPEVEYRGISGQVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDPSSLAKAQEEIDRVLQGRRPSYEDIKDLKFLNRCIIESLRLYPNPPVLIRRSQIPDELPGDYKINAGQDIMISVYNIHHSSKVWDRAEEFLPDRFDLNGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEATVALGVFLQHMNFELVPDQNISMTTGATIHTTNGLYMKLSRRLK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03766 241 PRINTS E-class P450 group I signature 98 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 PRINTS E-class P450 group I signature 139 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 PRINTS E-class P450 group I signature 177 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 PRINTS E-class P450 group I signature 56 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 PRINTS E-class P450 group I signature 187 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 PRINTS E-class P450 group I signature 36 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 PRINTS P450 superfamily signature 187 198 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 PRINTS P450 superfamily signature 178 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 PRINTS P450 superfamily signature 99 110 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 PRINTS P450 superfamily signature 47 64 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 SUPERFAMILY Cytochrome P450 32 239 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 Gene3D Cytochrome P450 23 239 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 PANTHER CYTOCHROME P450 FAMILY 4 31 239 - -
Trre1g03766 241 Pfam Cytochrome P450 31 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g03766 241 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 180 189 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03766 Trre-Chr1 36442486 36447137 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03766 31 239 Cytochrome P450 AT3G53130 79.904 2.25e-126 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03766 K09837 - gmx:100803324 394.045