Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03698 ATGGAGAAAAATGTATATGCATTGTTTGTTATGTTGTTGGTATTTGCTCTTATTTTCTCTCTATCTGAAGAGCTTAATGCAGATGGAAAATATCTTATGGACATAAAAGAGAGATTGTTTGATAAATACAATCATCTTGAGAATTGGAATTCAAGTGATTCAACACCTTGTGGTTGGAAAGGTGTCATCTGCAACAATGACATTAATCCAATGGTTGAATCTCTTGATTTGCATGCAATGAATCTCTCTGGCTCTTTGTCTTCCAGCATTGGTGGTTTGGTTCATTTGCTTCACCTTAACCTTTCTCAAAACACTTTCTTTGGTTTTATACCAAAGGAAATTGGAAACTGTTCAAGCTTGCAGGTTCTTAGTCTAAATATAAATGAGTTTAAAGGTCAAATTCCTGTTGAAATAGGCCGGCTTTCGAAGTTAACCGAATTGCATCTTTCCAATAACCAGCTCTCAGGACCTTTACCAGATGAAATTGGTAACCTTTCTTCACTCTCAATACTTACTCTTTACACAAATCATTTTAGTGGATCTTTGCCGCCTTCTATCGGGAATCTTAAAAGATTGATTCGGTTTCGAGCTGGACAGAATATGATATCAGGAAGTTTACCTCAAGAGATAGGTGGATGTGAGAATTTGGAGTATCTTGGTTTAACTCAAAATAAGATAAGTGGTGAAATGCCAAAAGAACTTGGTTTACTCAAGAACTTGCAATGCTTGGTCCTAAGGGAAAATGATCTTCATGGTGCTATACCTAAAGAGCTTGGAAACTGTACTAATTTGGAGGTTCTTGCTCTTTATCAGAACAATCTTGTGGAAGAAATTCCAAAGGAGCTTGGAAAACTTGAATTCCTAAAGAGACTATATCTTTACAGAAATGAGTTGACAGGAAATATTCCGAGGGAAATTGGAAATCTTTCTGTTGCAATTGAGATTGATTTTTCGGAGAATCTTCTAACAGGTGAGATACCGATCGAGTTGGTTAATATAAAAGGGTTGCAATTGCTTCATCTCTTCGAGAACAAGTTAACCGGCGCGATTCCAAATGAGTTCACCACATTGAAAAATCTAACTGAGTTGGATCTCTCTATTAATCATCTCAATGGTACTATTCCTATTGGATTTCAGGATTTGACCAAACTTACCTCTTTGCAACTCTTCAACAACTCATTAAGTGGTAGAATTCCGTATGCGCTCGGAGCAAATAGTCCACTTTGGGTGCTTGATTTGTCATTCAACTTTTTGGTTGGAAGAATTCCAATTCATCTTTGTCAACTATCTAACTTGATGATGTTGAACTTAGGATCAAACAAATTCTCCAGAAATGTACCTTATGGAATTACAACTTGCAAGTCTTTGGTGTATCTTCGCCTCTTCGGTAATAACTTGAGGGGCAAGTTTCCTTCTAATCTATGCAAGCTATTCAATCTTTCTACGGTTGAGTTGGATCATAATCAATTCACAGGTCCTATTCCTCCACAAGTTGGTTACTTCAAAAATTTGCAAAGACTTCATCTTTCTAACAACCATTTTTCATCTGAATTGCCGAAAGAAATCGGTAACCTCTCTCAGTTGGTCTCATTTAATGTCTCATCAAATTATCTTTCTGGTAGAGTGCCTGTGGAACTTTTCAAATGCAGGAAGCTCCAAAGACTTGATCTCAGCGGCAACGACTTCACAGGTACTTTATCAGGTGAGATAGGAACTCTTTCACAATTAGAGCTTCTTAGGCTTTCACATAACAACTTTTCTGGTAGTATTCCCTTGGAAGTCGGGAAACTTTGTCGGTTGACCGAGCTACAAATGAGCGAAAACTCATTTTGTGGTTACATTCCACAAGAATTAGGTTCCCTCTCATCCTTGCAAATTGCATTGAATCTCAGCTATAATAAACTTTCAGGCCAAATACCTTCTCAACTTGGGAATCTTATTATGCTAGAATCCCTCCAACTCAATAACAACCATTTGAGCGGCGAAATTCCAAACTCCTTTAACAGTCTTTCAAGTTTACTTTCCTTCAATTTCTCATACAATGATCTTATAGGACCTTTACCTTCTTTATCTCTCTTTCAAAACTCCACATTCAGCTCCTTTTCAGGTAACAAAGGACTATGTGGAGGACACCTTGTCCCTTGTCCAAATTCACCTTCACATTCCCCTCCAAATAAACTAGGAAAAATTCTAGCTATAGCTGCAGCTATTATTAGTGCAGTTTCATTGGTTTTAATTGTAGCTATTATATATCTCATGAGAAATTTCACTGTGTCACAACAAGTCATAGATAAACCAAATTCTCCACATGTTTCAAACATGTACTTTGTTCCAAAAGAGGAGTTGAGTTTCCAAGACATGGTTGAAGCTACTGAAAATTTTCATTCCAAATATGAAATTGGAAAAGGTGGTAGTGGAACTGTGTATAGAGCAGATATATCAACCGATGATCATACAACTATGAATTCAATTGCTATAAAGAAGTTAACATCAAATAGTCACAGCTTCGATGTAAATGGCTGCTTCCGCGCCGAAATCTTAACTTTAGGAAAAATAAGGCATAGAAATATTGTGAAATTATATGGTTTCTGCAACTATAGTGGCTCAAATATGTTACTTTATGAGTACATGGAAAAGGTTGTTGGTTCATATGGCTACATTGCCCCAGAATATGCATACACAATGAAAGTCACAGAAAAATGTGATGTCTACAGCTATGGAGTAGTCCTATTGGAGTTACTAACAGGCAGGAAACCAGTCCAATCATTGGATCAAGGTGGTGGTGATCTTGTAACTTGGGTCACAAATCATATCAACAAATATTCATTGAAACTAGACATCGTTGATGCAAAATTGGACCTACTACATGAAATTGATGTTGCACAAATATTTGATGTCTTAAAAATTGCGTTACTGTGCACCGACACTTCTCCTTCTAGACGACCAACTATGCGTAAAGTTGTTGCAATGCTTACAAGTTCTAGTAAAAGGAAAGAACAATCTTCATTCTCTCCATGTCATGAACCAAGTAACATAGAAGAATGA 3045 0.3685 MEKNVYALFVMLLVFALIFSLSEELNADGKYLMDIKERLFDKYNHLENWNSSDSTPCGWKGVICNNDINPMVESLDLHAMNLSGSLSSSIGGLVHLLHLNLSQNTFFGFIPKEIGNCSSLQVLSLNINEFKGQIPVEIGRLSKLTELHLSNNQLSGPLPDEIGNLSSLSILTLYTNHFSGSLPPSIGNLKRLIRFRAGQNMISGSLPQEIGGCENLEYLGLTQNKISGEMPKELGLLKNLQCLVLRENDLHGAIPKELGNCTNLEVLALYQNNLVEEIPKELGKLEFLKRLYLYRNELTGNIPREIGNLSVAIEIDFSENLLTGEIPIELVNIKGLQLLHLFENKLTGAIPNEFTTLKNLTELDLSINHLNGTIPIGFQDLTKLTSLQLFNNSLSGRIPYALGANSPLWVLDLSFNFLVGRIPIHLCQLSNLMMLNLGSNKFSRNVPYGITTCKSLVYLRLFGNNLRGKFPSNLCKLFNLSTVELDHNQFTGPIPPQVGYFKNLQRLHLSNNHFSSELPKEIGNLSQLVSFNVSSNYLSGRVPVELFKCRKLQRLDLSGNDFTGTLSGEIGTLSQLELLRLSHNNFSGSIPLEVGKLCRLTELQMSENSFCGYIPQELGSLSSLQIALNLSYNKLSGQIPSQLGNLIMLESLQLNNNHLSGEIPNSFNSLSSLLSFNFSYNDLIGPLPSLSLFQNSTFSSFSGNKGLCGGHLVPCPNSPSHSPPNKLGKILAIAAAIISAVSLVLIVAIIYLMRNFTVSQQVIDKPNSPHVSNMYFVPKEELSFQDMVEATENFHSKYEIGKGGSGTVYRADISTDDHTTMNSIAIKKLTSNSHSFDVNGCFRAEILTLGKIRHRNIVKLYGFCNYSGSNMLLYEYMEKVVGSYGYIAPEYAYTMKVTEKCDVYSYGVVLLELLTGRKPVQSLDQGGGDLVTWVTNHINKYSLKLDIVDAKLDLLHEIDVAQIFDVLKIALLCTDTSPSRRPTMRKVVAMLTSSSKRKEQSSFSPCHEPSNIEE 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03698 1014 ProSiteProfiles Protein kinase domain profile. 794 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g03698 1014 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 182 276 - -
Trre1g03698 1014 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Trre1g03698 1014 ProSitePatterns Protein kinases ATP-binding region signature. 800 828 IPR017441 GO:0005524
Trre1g03698 1014 Gene3D Ribonuclease Inhibitor 24 176 IPR032675 -
Trre1g03698 1014 SMART LRR_typ_2 141 164 IPR003591 -
Trre1g03698 1014 SMART LRR_typ_2 429 453 IPR003591 -
Trre1g03698 1014 SMART LRR_typ_2 646 669 IPR003591 -
Trre1g03698 1014 SMART LRR_typ_2 285 309 IPR003591 -
Trre1g03698 1014 SMART LRR_typ_2 501 525 IPR003591 -
Trre1g03698 1014 SMART LRR_typ_2 237 261 IPR003591 -
Trre1g03698 1014 SMART LRR_typ_2 357 380 IPR003591 -
Trre1g03698 1014 SMART LRR_typ_2 573 597 IPR003591 -
Trre1g03698 1014 SMART LRR_typ_2 93 117 IPR003591 -
Trre1g03698 1014 SMART LRR_typ_2 381 405 IPR003591 -
Trre1g03698 1014 SMART LRR_typ_2 165 189 IPR003591 -
Trre1g03698 1014 MobiDBLite consensus disorder prediction 992 1008 - -
Trre1g03698 1014 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 25 181 - -
Trre1g03698 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 405 719 - -
Trre1g03698 1014 Gene3D Transferase(Phosphotransferase) domain 1 876 1005 - -
Trre1g03698 1014 Gene3D Ribonuclease Inhibitor 380 722 IPR032675 -
Trre1g03698 1014 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 882 991 - -
Trre1g03698 1014 MobiDBLite consensus disorder prediction 992 1014 - -
Trre1g03698 1014 Pfam Leucine rich repeat 335 394 IPR001611 GO:0005515
Trre1g03698 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 757 876 - -
Trre1g03698 1014 Gene3D Phosphorylase Kinase; domain 1 757 875 - -
Trre1g03698 1014 SUPERFAMILY Protein kinase-like (PK-like) 782 999 IPR011009 -
Trre1g03698 1014 SUPERFAMILY RNI-like 74 417 - -
Trre1g03698 1014 SUPERFAMILY L domain-like 378 717 - -
Trre1g03698 1014 FunFam Piriformospora indica-insensitive protein 2 278 376 - -
Trre1g03698 1014 Pfam Protein tyrosine and serine/threonine kinase 797 879 IPR001245 GO:0004672|GO:0006468
Trre1g03698 1014 Pfam Protein tyrosine and serine/threonine kinase 885 990 IPR001245 GO:0004672|GO:0006468
Trre1g03698 1014 Gene3D Ribonuclease Inhibitor 313 379 IPR032675 -
Trre1g03698 1014 Gene3D Ribonuclease Inhibitor 177 235 IPR032675 -
Trre1g03698 1014 Gene3D Ribonuclease Inhibitor 236 312 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03698 Trre-Chr1 35477301 35480697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03698 880 991 Receptor kinase-like Gene Family AT5G56040 42.857 3.00e-22 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre1g03698 PK_Tyr_Ser-Thr 1.9e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03698 - - psat:127091273 1446.8