Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03667 ATGGGGAGCTTACACTTTGAAGTTTTTGCTTATTGGAGAGGAAGGCTTGATGAAGAGGAGAAGACCCATATAATCACCCGAGTTGCAGGCACAATAGGATATATGGCACCGGAATATGCTTTATGGGGTTACTTGAGTTACAAAGCTGATGTTTACAGTTTTGGAGTTGTGGTCTTGGAAACTGTTAGTGGAAAGAATGTTCATCGGCAACGGATAGTCAATTGGATCAATGCAACCGACGGTACTTCATCAGCATTCGATATCACTACAAAGAGGATACTTCATTCCTCTCTGCATAACGAATATTGGAGGATGATATAG 321 0.4143 MGSLHFEVFAYWRGRLDEEEKTHIITRVAGTIGYMAPEYALWGYLSYKADVYSFGVVVLETVSGKNVHRQRIVNWINATDGTSSAFDITTKRILHSSLHNEYWRMI 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03667 106 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 106 - -
Trre1g03667 106 Pfam Protein tyrosine and serine/threonine kinase 26 66 IPR001245 GO:0004672|GO:0006468
Trre1g03667 106 ProSiteProfiles Protein kinase domain profile. 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g03667 106 SUPERFAMILY Protein kinase-like (PK-like) 22 69 IPR011009 -
Trre1g03667 106 Gene3D Transferase(Phosphotransferase) domain 1 9 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03667 Trre-Chr1 35063934 35065962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03667 3 66 Receptor kinase-like Gene Family AT1G53440 67.188 3.02e-23 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre1g03667 PK_Tyr_Ser-Thr 1.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03667 - - mtr:11406167 105.916