Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03647 ATGGAGCCTCACATTAATGGTTCTCTTCCATTAATGTTACTAATTATTACTCCTTTCCTTTTACTATCTCTCTATGCCAAAGCTGAAAGCTCCACCTACATAGTCCACATGGACAAATCCCTCTTGCCTCAAGTCTTCACAAGCCATGATAATTGGTATGAATCCACTCTTCAATCATCAAAAACACAAATTGATGATCATGTTCACTCATCAAAGAAATTAGTTTACACTTATAATCATGCCATGCATGGATTCAGTGCAGTTCTATCACCAAATGAGTTAAACAACCTTAAAAAATCTCATGGTTTTGTCTCAGCTTATCCTGATAGAACAGCTACAATAGACACAACACATACCTTTGAGTTTCTTTCATTAGACCCTTCAAAAGGGTTATGGAATGCATCAAATTTAGGTGAAAATGTTATTGTTGGTCTTATTGACACCGGTATTTGGCCAGAAAGTGAAAGTTTCAAAGACGATGGAATGTCGAAAAACATCCCAACAAAATGGAAAGGAAAATGTGAAAATGGACAAGATTTCAATACTTCAATGTGTAACTTGAAACTAATTGGAGCTAGATATTTCAACAAAGGTGTAATTGCATCAAAACCAAATGTCAAAATTAGTATGAACTCACCTAGAGACACACAAGGCCATGGTAGTCACACATCTTCGACAGTCGCCGGTAACTATGTCAATGATGCATCATATTTTGGTTATGCAAAAGGTGTAGCTAGAGGTATTGCACCAAAAGCTAGACTAGCAATGTATAAAGTACTTTGGGACGAGGGGCGACAAGCTTCCGATGTTCTTGCAGGAATGGACCAAGCTATTGATGATAATGTTGATATTATTTCAATCTCTTTAGGTTTTGATGATGTTCCACTTTATGAAGATCCAGTTGCAATAGCTTCATTTGCAGCTATGGAAAAAAATGTTATTGTTTCATCTTCTGCAGGAAATGAAGGTCCAAAACTTGGTACATTACACAATGGAATCCCTTGGGTTATGACCGTGGCCGCAGGCACAATTGACCGAACTTTTGGTAGTTTGATTCTTGGAAACGGCGAAATTATTGTTGGTTGGACTTTGTTTCCTGCTACTAATGCTATTGTTCAAAATCTTGAACTTGTTTACAACAAAACTTTATCATCATGCAATTCATTTAGTCTTTTAAGTGAAGCTGCAACAAGAGGGATTATTGTTTGTGAAGCATTGGAATCAGTTTCAGTTATTAATCAAATCTATAATGTTTCTTCAGCAAGTGTTGTTGGTGCTGTTTTTATCTCAGAAGATCCAATATTGATTGAAACAGGAAGAATTTTTTCTCCAAGTATTGTGATTAGTCCAAAAGACAAAAAAGCGCTTATTCGATATATAAAAAGTGTTGAATTTCCAATTGCTAGTATCAATTTTCAACAAACATTTGTTGGTATAAAGCCAGCACCAGCTGCTGCTTATTACAGTTCAAGAGGTCCTTCAAAAAGTTATCCAAGAATCTTAAAGCCTGATGTAATGGCACCTGGCTCGAATGTTTTAGCCGCTTATGTTCCGACTTTATCATCGGCTACAATAGGAAGAAATGTTTTTTTATCAAGTAATTACAATCTTCTTTCAGGCACATCAATGTCGTGTCCTCATGCGTCAGGTGTTGCGGCTTTGTTAAAAGCCGCAAAACCTGATTGGAGTGCAGCTGCGATAAGATCAGCAATAGTTACCACAGCTAATCCATTCGATAATACGCAAAATCCGATTATGGACAATGGTAATCCGTCTCACTTCGCTTCACCTCTTGTTATGGGAGCCGGCGAGATTGATCCTAATAAAGCATTGGACCCCGGTTTAATATACGATGCTACACCGCAAGACTATGTTAATCTCCTTTGTGATTTTGGTTATACACATAATCAAATCTTGACAATTACAAGATCGAAAAAATATAATTGCGATAACCCTTCGTCCGATCTTAATTATCCTTCTTTTATAGCTTTGTATGGTAACAAAACAAAGACAATGGTGCAAAAGTTTTCGAGGACTGTGACTAATGTTGGAGATGGTGCTGCTGCTTACAATGTTAAGGTGACAAAACCAAAGGGTTTTGTTGTAACTGTGTTACCTGAGAAGCTAACATTTAGTTATAAGAATGAGAAGCTAAGATACTCTGTTGTTGTAAAGTATAAGAGGAAAAATAAGAAGGAAAATGATGTGTTATTTGGTGACATTGTTTGGGTTGAAGAGGGTGGTGCACATAGTGTTAGGAGTCCAATTGTTGTGGCACCAAATGATATTGTATGA 2295 0.3682 MEPHINGSLPLMLLIITPFLLLSLYAKAESSTYIVHMDKSLLPQVFTSHDNWYESTLQSSKTQIDDHVHSSKKLVYTYNHAMHGFSAVLSPNELNNLKKSHGFVSAYPDRTATIDTTHTFEFLSLDPSKGLWNASNLGENVIVGLIDTGIWPESESFKDDGMSKNIPTKWKGKCENGQDFNTSMCNLKLIGARYFNKGVIASKPNVKISMNSPRDTQGHGSHTSSTVAGNYVNDASYFGYAKGVARGIAPKARLAMYKVLWDEGRQASDVLAGMDQAIDDNVDIISISLGFDDVPLYEDPVAIASFAAMEKNVIVSSSAGNEGPKLGTLHNGIPWVMTVAAGTIDRTFGSLILGNGEIIVGWTLFPATNAIVQNLELVYNKTLSSCNSFSLLSEAATRGIIVCEALESVSVINQIYNVSSASVVGAVFISEDPILIETGRIFSPSIVISPKDKKALIRYIKSVEFPIASINFQQTFVGIKPAPAAAYYSSRGPSKSYPRILKPDVMAPGSNVLAAYVPTLSSATIGRNVFLSSNYNLLSGTSMSCPHASGVAALLKAAKPDWSAAAIRSAIVTTANPFDNTQNPIMDNGNPSHFASPLVMGAGEIDPNKALDPGLIYDATPQDYVNLLCDFGYTHNQILTITRSKKYNCDNPSSDLNYPSFIALYGNKTKTMVQKFSRTVTNVGDGAAAYNVKVTKPKGFVVTVLPEKLTFSYKNEKLRYSVVVKYKRKNKKENDVLFGDIVWVEEGGAHSVRSPIVVAPNDIV 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03647 764 Gene3D Peptidase S8/S53 domain 140 624 IPR036852 GO:0004252|GO:0006508
Trre1g03647 764 Pfam Fibronectin type-III domain 655 758 IPR041469 -
Trre1g03647 764 Gene3D - 628 760 - -
Trre1g03647 764 Gene3D - 345 477 - -
Trre1g03647 764 FunFam Subtilisin-like protease SBT1.5 140 353 - -
Trre1g03647 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 114 IPR037045 -
Trre1g03647 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Trre1g03647 764 CDD Peptidases_S8_3 113 576 IPR034197 -
Trre1g03647 764 CDD PA_subtilisin_like 350 470 - -
Trre1g03647 764 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Trre1g03647 764 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Trre1g03647 764 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Trre1g03647 764 SUPERFAMILY Subtilisin-like 115 615 IPR036852 GO:0004252|GO:0006508
Trre1g03647 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 758 IPR045051 -
Trre1g03647 764 Pfam Subtilase family 138 579 IPR000209 GO:0006508|GO:0008236
Trre1g03647 764 ProSiteProfiles Serine proteases, subtilase domain profile. 119 611 - -
Trre1g03647 764 FunFam Subtilisin-like protease SBT1.9 22 115 - -
Trre1g03647 764 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03647 Trre-Chr1 34577854 34580148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03647 11 759 Subtilisin-like Serine Gene Family AT5G67090 42.057 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03647 - - gmx:100806072 1147.11