Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03610 ATGGAGTTATTAGGAAGCACACAACAACGGCAGCAGCCATACCTAGCGACGAGAATGAATGAACAGGAAGCACACAACAACGGCGGCAGCCATGCAATACCTGATTCCAGTTTTGTTGAGGAATCTAGATTTGTGTTTGAAGCTAAGACTTTGCGACCAATTGAGCTTTTGGTGTTGTCTACTTTGAAATGGTGGATGCATCCATTGACACCAATTTCTTTCTTTGAACACATTGTTAGAAGACTTGGTTTGAAGAGCTGTTTGCATTGGGAGTTTATGTGGCGTTGTGAGAGGGTTCTTCTTCATGTCATTGTTGAAGACTTGGTTTGA 330 0.4242 MELLGSTQQRQQPYLATRMNEQEAHNNGGSHAIPDSSFVEESRFVFEAKTLRPIELLVLSTLKWWMHPLTPISFFEHIVRRLGLKSCLHWEFMWRCERVLLHVIVEDLV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03610 109 Gene3D - 36 67 - -
Trre1g03610 109 MobiDBLite consensus disorder prediction 1 34 - -
Trre1g03610 109 Gene3D - 68 87 - -
Trre1g03610 109 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03610 Trre-Chr1 33845992 33847220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03610 39 106 Core Cell Cycle Gene Families AT4G34160 60.294 2.66e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03610 K14505 - gmx:100785030 122.864