Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03565 ATGGCCAATAAAAAGTTCTTGGTTTCTCTCTTGCTCATTACATTGCTCCAAATCCAAACCAAAGTGTTCTGTTTTCAATACCAAGTTGGAGATCTAAATGCTTGGGGTATACCCACCTCAACAAATCCACAAGTCTATACCAAATGGTCCAAATTTCACAACTTCACCCTTGGAGACTCACTTTTGTTTCTATATCCACCAAGTCAAGATTCATTGATTCAAGTAACACAAGAATCATACAGGAGTTGCAATATTAAAGATCCAATATTGTTTATGAACAATGGTAACTCTTTATTTAACATAACATCAAAAGGTGATTTTTACTTCACAAGTGGTGTAAATGGTCATTGCCAAAAGCATCAAAAGATTCATATATCTGTTGGAGGAATTGGAAATGTTGATGAAGATGCTAATAGTCCAAGTTCATTGCCTGCAAATGGACCCTCTTATCAAAATGTATTTGGAAGCATTCCAATAGCTCCTTCTACATCAAATTCACACCACCTAACTTCAACTTTTCATGTTCTTACTATTGGATCTCTCATATATGCAATGTTCTTTACTTTAATGTAA 573 0.3455 MANKKFLVSLLLITLLQIQTKVFCFQYQVGDLNAWGIPTSTNPQVYTKWSKFHNFTLGDSLLFLYPPSQDSLIQVTQESYRSCNIKDPILFMNNGNSLFNITSKGDFYFTSGVNGHCQKHQKIHISVGGIGNVDEDANSPSSLPANGPSYQNVFGSIPIAPSTSNSHHLTSTFHVLTIGSLIYAMFFTLM 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03565 190 Gene3D - 24 130 IPR008972 -
Trre1g03565 190 PANTHER BLUE COPPER PROTEIN 23 149 IPR039391 GO:0009055
Trre1g03565 190 Pfam Plastocyanin-like domain 42 120 IPR003245 GO:0009055
Trre1g03565 190 SUPERFAMILY Cupredoxins 24 127 IPR008972 -
Trre1g03565 190 FunFam Early nodulin-like protein 1 24 131 - -
Trre1g03565 190 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03565 Trre-Chr1 33258399 33259063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03565 3 159 Phytocyanin Superfamily AT1G64640 55.975 3.03e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03565 - - gmx:100527517 270.011