Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03495 ATGGCAATGGCTAATTTAATGACAATGTTTATGCTAATAGAGGTGATTACGTGCGGGTTCGGGTTCGGTTTCGGGGCAGATAGTGGTTTAAACATGAACTACTATTTGATGAGTTGCCCTTTTGTTGAACCTGTTGTTAAGAATGTAGTCAATAGAGCTTTAGACAATGATCCCACCCTTGCAGCTGCTCTTGTTAGAATGCACTTCCATGACTGCTTCATACAGGGATGTGATGGGTCAATTCTAATTGACTCTACTAAGGATAATACAGCAGAGAAGGATTCACCAGCAAATTTGAGCTTAAGAGGATACGAAATCATAGATGATATCAAAGATGAGCTTGAAAGACGATGCCCCGGTGTGGTTTCATGTGCTGATATTCTTGCTATGGCCGCTACAGAAGCCGTTTTCTATGCTGGAGGTCCAGTTTATAACATACCTAAAGGTAGAAAAGATGGAAGGAGATCAAAAATAGAAGATACTAGAAATTTGCCATCCCCTGCCTTCAATGCCTCGGAGCTCATTAGGATGTTTGGTCAACATGGTTTTTCTGCACAAGAAATGGTGGCTCTCTCTGGGGCTCATACATTAGGAGTGGCAAGGTGTTCATCTTTCAAAACCAGATTGAGCCAAGTGGATCCAGCTTTGGATTCTGAATTTGCTAAGACACTATCCAAAACATGTACTTCTGGTGACAATGCAGAACAACCATTTGATGCAACTAGGAATGATTTTGACAATGTTTACTTCAATGCTTTGTTGAGGAAAAATGGTGTTCTATTTTCAGACCAAACACTCTACACTAGTCCAAGAACAAGAAACATTGTGAATGCTTATGCAATGAACCAAGCTATGTTCTTCCTTGATTTTCAACAAGCAATGGTGAAAATGGGTTTGCTTGATATTAAACAAGGTTCCAATGGTGAAGTTCGAGACAATTGTCGCAAAATAAACTAA 957 0.3992 MAMANLMTMFMLIEVITCGFGFGFGADSGLNMNYYLMSCPFVEPVVKNVVNRALDNDPTLAAALVRMHFHDCFIQGCDGSILIDSTKDNTAEKDSPANLSLRGYEIIDDIKDELERRCPGVVSCADILAMAATEAVFYAGGPVYNIPKGRKDGRRSKIEDTRNLPSPAFNASELIRMFGQHGFSAQEMVALSGAHTLGVARCSSFKTRLSQVDPALDSEFAKTLSKTCTSGDNAEQPFDATRNDFDNVYFNALLRKNGVLFSDQTLYTSPRTRNIVNAYAMNQAMFFLDFQQAMVKMGLLDIKQGSNGEVRDNCRKIN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03495 318 FunFam Peroxidase 165 297 - -
Trre1g03495 318 Pfam Peroxidase 46 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 Gene3D - 33 318 - -
Trre1g03495 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Trre1g03495 318 FunFam Peroxidase 33 176 - -
Trre1g03495 318 CDD secretory_peroxidase 29 317 IPR033905 GO:0004601|GO:0042744
Trre1g03495 318 PANTHER - 22 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 SUPERFAMILY Heme-dependent peroxidases 29 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 Gene3D Peroxidase, domain 2 165 297 - -
Trre1g03495 318 ProSiteProfiles Plant heme peroxidase family profile. 29 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g03495 318 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03495 Trre-Chr1 31369397 31372132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03495 1 318 Peroxidase AT4G33420 72.642 2.40e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03495 K00430 - gmx:100776019 527.324