Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03456 ATGCGAGAGATTGCTGAGGCCTACCTTGGATCTGCAATTAAGAACGCTGTTGTCACAGTTCCAGCTTACTTTAACGATTCTCAGCGTCAAGCTACTAAGGATGCTGGGGTTATTGCTGGTCTTAATGTCATGGGGTTATTTCTAATCCTCCTCTTTCTAATAAGGATTATCCAATGCCGAAGTTTGATGTTGCGGTTGATAATGGTACCACGGCTCAAGAGAATGGTCCACATCGAATGA 240 0.4375 MREIAEAYLGSAIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMGLFLILLFLIRIIQCRSLMLRLIMVPRLKRMVHIE 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03456 79 PANTHER HEAT SHOCK PROTEIN 70KDA 1 46 IPR013126 GO:0005524|GO:0140662
Trre1g03456 79 FunFam heat shock 70 kDa protein-like 1 49 - -
Trre1g03456 79 Gene3D - 1 62 - -
Trre1g03456 79 Pfam Hsp70 protein 1 44 IPR013126 GO:0005524|GO:0140662
Trre1g03456 79 SUPERFAMILY Actin-like ATPase domain 1 46 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03456 Trre-Chr1 30952447 30952817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03456 1 44 Calmodulin-binding Proteins AT1G56410 95.455 1.87e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03456 K03283 - mof:131149549 80.1073