Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03452 ATGAAGGGGAAGCAGTTGAAGAGAGTGCAAAATAGGCAAAGTCGTTCTTCATTTATGTGGTGGACAACTAGGATGCTGAATTTTATGCCAAGTATTATTGTACAGTACACAACAGCAATTGATATATGGAGCATTGAATGCATTTTTGCAGAAGTGCTGACAGGAAAGCCATTGTTTCCTGGTGAAAGCATTGTGTATCAATTAGATTTGATTACCGATTTTCTTGGAACACCACCACCCGAAATTATCTCAGGAGTTCCAAAGGAGAAGGCAAAGAAGCACCTGATGGAGATGCAGAAGAAACTTCCTCTGCCATTTGAACGGAAATTTTCGCCCAACTTCCTGTATCCTAGTGCAATAGACCAATTCAGAAAGCACTTTGCATATCTTGGCTATTGA 399 0.4035 MKGKQLKRVQNRQSRSSFMWWTTRMLNFMPSIIVQYTTAIDIWSIECIFAEVLTGKPLFPGESIVYQLDLITDFLGTPPPEIISGVPKEKAKKHLMEMQKKLPLPFERKFSPNFLYPSAIDQFRKHFAYLGY 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03452 132 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 30 121 - -
Trre1g03452 132 SUPERFAMILY Protein kinase-like (PK-like) 35 113 IPR011009 -
Trre1g03452 132 Gene3D Transferase(Phosphotransferase) domain 1 33 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03452 Trre-Chr1 30907051 30909357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03452 20 113 MAP Kinase Gene Family AT3G14720 62.766 4.00e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03452 - - gmx:100800878 127.487