Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03406 ATGGCTAGAGATGGTAGTGTTGTACCTGCGGACCCGCAGGCTATGGTAGTTGCGAAGAAGAAGACACAGACTTCTAGAAGTTGGATTTTGTTTGATGCTATGGGCCAAGGGTCGATGCTTGATGCTGACAAGTATGCCATCATGCATAGGGTTCAAATTAATGCACGTGATCTTAGAATTCTTGATCCCTTGCTATCTTACCCTTCTACTATTCTTGGTCGTGAGAAAGCTATTGTTCTTAACTTGGAGCATATCAAGGCAATTATCACTGCTGAAGAGGTATTGCTGAGAGATCCAACAGATGAACATGTGGTCCCTGTTGTTGAGGAACTGCAGAGGCGATTGCCTAAAGAGTATCTTGGTGGTCAACAGGATGCTGAAGCGGCTGAAGAAGATGAGTCACCGTTTGAGTTTCGTGCCTTGGAGGTGGCTTTAGAAGCCATTTGTAGTTTTCTTGCTGCACGTACAACTGAGTTAGAGATGGCTGCTTATCCTGCATTAGATGAACTTACCTCCAAGATTAGTAGTCGTAATTTGGACAGAGTTCGTAAACTGAAAAGTGCAATGACAAGGCTGACTGCCCGGGTTCAAAAGGTCAGAGATGAGCTTGAACAGTTGCTGGATGACGATGATGACATGGCCGACCTATATTTGTCGAGAAAGGCAGGTTCAGCATCACCAGTTAGTGGATCAGGTGCTGCAAATTGGTTCGCTGGCTCCCCAACCATAGGATCAAAGATATCCAGAGCAAGTAGAGCAAGCATCGCAACAGTTCGTTTAGATGAAAATGACGTGGAAGAGCTTGAAATGTTGCTTGAGGCTTATTTCATGCAAATTGATGGCACATTAAACAAATTAACCACCCTGCGAGAATATATTGATGATACTGAAGATTACATTAACATTCAACTTGACAACCATCGTAATCAGCTTATTCAGTTGGAACTCTTTCTTAGCTCTGGAACTGTTTGCCTATCTTTGTATTCTCTGGTGACTGCTATTTTTGGCATGAACATCCCATATACTTGGAATGAACAACATGGATATATGTTCAAATGGGTAGTTATTGTCTCGGGAGCATTTTCCGCTATTATGTTTATCATGATTACCTTCTACGCTCGCAAAAAGGGGTTGGTTGGATCATAA 1146 0.4276 MARDGSVVPADPQAMVVAKKKTQTSRSWILFDAMGQGSMLDADKYAIMHRVQINARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDEHVVPVVEELQRRLPKEYLGGQQDAEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSASPVSGSGAANWFAGSPTIGSKISRASRASIATVRLDENDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSLYSLVTAIFGMNIPYTWNEQHGYMFKWVVIVSGAFSAIMFIMITFYARKKGLVGS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03406 381 Pfam CorA-like Mg2+ transporter protein 254 369 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre1g03406 381 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 317 369 IPR045863 -
Trre1g03406 381 CDD Mrs2_Mfm1p-like 28 378 IPR039204 -
Trre1g03406 381 Gene3D - 14 99 - -
Trre1g03406 381 Gene3D Magnesium transport protein CorA, transmembrane region 102 311 - -
Trre1g03406 381 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 379 IPR039204 -
Trre1g03406 381 Coils Coil 182 209 - -
Trre1g03406 381 FunFam Magnesium transporter MRS2-1 16 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03406 Trre-Chr1 30248339 30253825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03406 1 354 MRS2 Gene Family AT5G64560 79.076 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03406 K16075 - gmx:100810239 634.409