Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03348 ATGGCTCCTACACCTTCTTCTAAGCAAATGAATTCAACCCATTTAATAACTCCACGTTCAAAGCATCGAATCAATTTCAATGGCTACAAAGCAGCACCAACACCACCACATCCACATCCATCACCAAATCTCAATTTCAAAGAAACCCCTCATGAACACCCAATTGAAGTTATTGCTAGAATTCGCGACTACCCAGATCGAAAAGACAAGCCTTTATCGGTTCTTCAAGTGAGTTCTAACTCTAGATCTATTAGGGTTCGCGCTGATTTTGGGTATAGGGACTTTACCCTTGATGGGGTTTCTGTTTCTGAGGAAGAGGAATTAGATTTGTTCTATAAGAAATTTGTTGAATCAAGGATCAATGGTGTTAAATTGGGAGATAAATGTACTATTATGATGTATGGACCAACTGGTTCTGGTAAGAGTCACACCATGTTTGGTTGTTCAAAGCAAGCTGGGATTGTGTATAGGGCTTTGAGGGATATTCTTGGTGATGGTGATACAGATTCTGAGGGTGGTGGTGGTGATGGAAGTGATGCTGATTCTAAAGGAATGTGTGTTGGATTGAGAACTTTTGTTCAGGTTACTGTTTTGGAGATTTATAATGAAGAGATTTATGATCTTTTGTCCACCAATGGAGGAGGTGGTGGAGGTGGAGGGTTCGGTTTCGGTTGGTCTAAGGGCAATGCTTCAAAGGTGAAACTTGAAGTGATGGGGAAAAAGGCTAAGAATGCAACCTATATATCTGGAAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGGAGGATTGTTAAAAGCACACTTTGTAATGACAGGAGTTCTAGAAGTCACTGCATGGTGATACTTGATGTCCCAACAGTGGGAGGGCGGCTAATGCTTGTTGACATGGCCGGATCAGAAAATATTGAACAAGCTGGTCAAACTGGATTTGAGGCAAAAATGCAGACTGCAAAAATTAATCAAGGAAATATAGCACTGAAGAGAGTGGTCGAGTCAATTGCAAATGGCGATTCACATGTGCCTTTTAGAGACAGCAAACTTACCATGCTTCTGCAGGATTCATTTGAAGATGATAAGTCAAAGATTCTAATGATACTATGTGCAAGTCCTGATCCTAAGGAGATACACAAGACAATCTCTACACTGGAATATGGAGCCAAAGCAAAATGTATAGTTCGTGGTCCTCATACCCCGGTTAAGGAGGAGGACTCTTCTTCTACCGTCATTTTGGGATCCAGAATTGCTGCAATGGATGAATTTATCATGAAGCTACAAATGGAAAACAAACTAAGAGAGAAAGAGCGAAACGAAGCGCACAAAAAGCTCATGAAGAAAGAGGAAGAAATTGCTGAGTTAAGAGCTAAAATGGAAACAACTCCTGCAAGTGAGGAGGAGATTAACCTAAAGGTAAACGAACGAACACGCCTTTTGAGACAAGAGTTGGAAAAGAAGTTGGAAGAGTGTCAAAGAATGACTAATGATTTTGTCGAGTTGGAGAGGAAGAGAATGGAAGAACGCATATTGCAGCAGCAGGAGGAAGTTGAAATCCTGAGAAAGAGACTGGAAGAAATTGAGTTGCAGTTGCATTGTTCTTCAAAGAAAGAGCATGTCGATGAAAATGAATCAAAAGAGATGGAGCCAAGTGGGTTTATGAGAAAACTACTTCGTGTTTACAAAAGCGAGGATGATCCTGGAATGGTGAAATCGATGGATTTAGACATGGATGATCAAGAACCCTCCCTTGCACGTGAAGTTATTATCGGCATGCAAGACACTTCACCAAATCAACCTTGTTCAATGAATGGTGTACAAGAAAATGCTTATGTTTGTGCACCAAACTTTGGTCAAAAAGCATGTCTAAGTACAGTATATGAAGAAGAAGGTGAAGGAGAGCAAGATCATGAGGATAAAGTGGAAGAAGATGAGGAAGTAGAGAAAGAAGTGATAGAGGAAAAAAGGGTATGTAGTGTTAGCAAAAGTCCAAAGAGAGAAGATTACTCTTCTGAAGCTGACAAGGAAAATAATGGTTCCAATAGACTATTGAGGATACATAACATATTCACTCTTTGTGGAAACCAAAGGGAACTCTCTCAATATGGAACTCCAATCCCTACAAAAAAGAGGTCTGATGAAGGTTTTGATTTTGATCTCAAATATTCTCCTATAAAATCAAGTGAGAAGAAAGATTCTGTCTTAAGAATGTCCAACAAAGAGAACATGGAACAATATGTTGTTGGAAATTAG 2259 0.398 MAPTPSSKQMNSTHLITPRSKHRINFNGYKAAPTPPHPHPSPNLNFKETPHEHPIEVIARIRDYPDRKDKPLSVLQVSSNSRSIRVRADFGYRDFTLDGVSVSEEEELDLFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRALRDILGDGDTDSEGGGGDGSDADSKGMCVGLRTFVQVTVLEIYNEEIYDLLSTNGGGGGGGGFGFGWSKGNASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKEEDSSSTVILGSRIAAMDEFIMKLQMENKLREKERNEAHKKLMKKEEEIAELRAKMETTPASEEEINLKVNERTRLLRQELEKKLEECQRMTNDFVELERKRMEERILQQQEEVEILRKRLEEIELQLHCSSKKEHVDENESKEMEPSGFMRKLLRVYKSEDDPGMVKSMDLDMDDQEPSLAREVIIGMQDTSPNQPCSMNGVQENAYVCAPNFGQKACLSTVYEEEGEGEQDHEDKVEEDEEVEKEVIEEKRVCSVSKSPKREDYSSEADKENNGSNRLLRIHNIFTLCGNQRELSQYGTPIPTKKRSDEGFDFDLKYSPIKSSEKKDSVLRMSNKENMEQYVVGN 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03348 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 403 IPR027417 -
Trre1g03348 752 Pfam Kinesin motor domain 80 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre1g03348 752 Coils Coil 476 539 - -
Trre1g03348 752 ProSiteProfiles Kinesin motor domain profile. 54 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre1g03348 752 MobiDBLite consensus disorder prediction 631 679 - -
Trre1g03348 752 Coils Coil 433 460 - -
Trre1g03348 752 PANTHER KINESIN-RELATED 57 671 IPR027640 GO:0003777|GO:0007018
Trre1g03348 752 PRINTS Kinesin heavy chain signature 272 289 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre1g03348 752 PRINTS Kinesin heavy chain signature 295 313 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre1g03348 752 PRINTS Kinesin heavy chain signature 345 366 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre1g03348 752 PRINTS Kinesin heavy chain signature 126 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre1g03348 752 MobiDBLite consensus disorder prediction 652 679 - -
Trre1g03348 752 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 36 401 - -
Trre1g03348 752 Gene3D Kinesin motor domain 39 399 IPR036961 -
Trre1g03348 752 CDD cwf21_CWC21-like 444 490 - -
Trre1g03348 752 SMART kinesin_4 52 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre1g03348 752 MobiDBLite consensus disorder prediction 631 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03348 Trre-Chr1 29718910 29722113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03348 109 406 Calmodulin-binding Proteins AT5G65930 27.619 4.21e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03348 - K10398 gmx:100779567 1043.49