Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03332 ATGAGAGCTAAGAGTTTGAAAATTAAGAGGAAGTTTAGTATTAGAAGAAAATTGAAGAAGATGATAAAGTGTGTGTGTTCAAGGGATAAGTTAAGTGTAGATGAAATGAATTATTCATCAGAATCACTTGCAACTAGGGACTATTCAGCAACAGCAAGTGGTTATTCATCTCATCCTGGTGAAAATGGAACAAAGGTAGATAATAGTAACATTGAAGAAGCAGAGTTATCTCTTCGTGAAAGTGGTTATTTAAACTATGAGGAAGCTAGAGCCTTGTTAGGAAGACTTGAGTATCAGAAAGGCCACATTGAAGCTGCTCTTCATGTATTTCAAGGAATAGACATTGCTGCTGTCATTCCCAAAATGAAAATGTCTATATCGAAAAGATGTGAATCCGATAATAAACGCCGTCCGCAAAGTGATTCAGTGCCTTCTATGTCAATACATGCTGTTAGTTTACTTCTTGAAGCTGTTTTCCTCAAAGCTAAATCATTGCAGACTATTGGAAGGTTTCAAGAAGCTGCTCAATCATGCAAAACTATTTTAGACACTATTGAATCTGCACTACCAGAAGGCTGGCCTGAAAACTTTGTTTCAGATTGCAAATTACAAGAAACGGTTATAAATGCTGTTGAGCTACTTCCTGAGTTATGGAACCTTGCAGGCTCTCCTCAAGATGTTATCTTATCATTTAGGAAAGCATTACTTTATCATTGGAATCTTGACAATGAAGCAACTGCAAGAATACAAAAGGAATTCGCATTGTTTCTTTTGTACAGCGGTTACGAAGCGGACTCTCCTTCGCTTCGGTCGCAATTGGATGGTTCGTTTGTGCCGAGAAACAACATAGAAGAAGCTGTTCTTCTACTTCTGATTCTGCTGAGAAAATCAAAAGATCCTTCAATAATTCATCACCTTTCTTTTGCTCTAAGTATTTGCGTGAATTCGTGA 951 0.3733 MRAKSLKIKRKFSIRRKLKKMIKCVCSRDKLSVDEMNYSSESLATRDYSATASGYSSHPGENGTKVDNSNIEEAELSLRESGYLNYEEARALLGRLEYQKGHIEAALHVFQGIDIAAVIPKMKMSISKRCESDNKRRPQSDSVPSMSIHAVSLLLEAVFLKAKSLQTIGRFQEAAQSCKTILDTIESALPEGWPENFVSDCKLQETVINAVELLPELWNLAGSPQDVILSFRKALLYHWNLDNEATARIQKEFALFLLYSGYEADSPSLRSQLDGSFVPRNNIEEAVLLLLILLRKSKDPSIIHHLSFALSICVNS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03332 316 PANTHER PROTEIN NPG1 22 314 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03332 Trre-Chr1 29556490 29558448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03332 14 313 Calmodulin-binding Proteins AT4G28600 58.013 7.30e-112 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03332 K21843 - gmx:100789469 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03332 1 29556490 29558448 Trre1g03332 1 29556490 29558448 ECH