Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03316 ATGGGTGATGGAGTTGATTTAGCATCGGCATCAAAAGACGTAGCAAACGTGGTAGACGAATACATTCTCGTGTGTGAAGATGATGAGTCCAAACCAGTAATCGGTAAAGTGTTTGATTCTTTAGAACAAGCAGGAAATTTTTATAAAATGTATGCACATTCTGTTGGATTTAGTGTGCGTAATTCGTCTCAAACGAGCGATAAATATGGTGTAAAATGGAATTATTTTCTATGTTCAAAAGAAGGTTTTAAAGTAGGAAAACAGATAGATGGATTAGTTATTAATGAAAATGGTTTGCCTAAAGTTAGAAAAAGAAAATTGACAAGGGAGGGGTGTAATGCAAAGATTGTTTTTAAGAGAACAATAGAGGGTAAATATGAAGTTGCAAAGTTCTACGAAGGTCATACACATGAACTAGTTACACCTAGAAAGAAGCAACTCCTACGGTCAGCAATGAGTGTTAGCAGTGCTCATAAGAAACTATTGTTTTCATATGGCAATGCTAATGTGGGGCCTTCTAAAGTTTTTCAATTAATGAAAAAGCAAGTCGGGAGTTATGAAAATTTTGGATGTACACAAAGAGATATTCAAAATTATTCAAAAGATTTCAAAGAATTGATCAAAGACTCGGATTCACATATCTTTATTGATAACTTTAGGAGAAAACATGAGAGGAACCCATCATTTTTCTATGACTATGTGGCTGATAATGAAGGGAGATTGAAATATGTGTTTTGGGCTGATGGTATTTCTCGAAAAAATTACTCTTTATTTGGAGATGTCATTTCATTTGACACAACATATAGAACAAATAAGTATTCGATGATTTTTGCTCCATTTACCGGCATAAATCATCATCGTCAAAGTGTAACCTTCGGGGCTGCCTTCTTGGTAGATGAAAAAAGTGATTCAGCTTGA 918 0.3442 MGDGVDLASASKDVANVVDEYILVCEDDESKPVIGKVFDSLEQAGNFYKMYAHSVGFSVRNSSQTSDKYGVKWNYFLCSKEGFKVGKQIDGLVINENGLPKVRKRKLTREGCNAKIVFKRTIEGKYEVAKFYEGHTHELVTPRKKQLLRSAMSVSSAHKKLLFSYGNANVGPSKVFQLMKKQVGSYENFGCTQRDIQNYSKDFKELIKDSDSHIFIDNFRRKHERNPSFFYDYVADNEGRLKYVFWADGISRKNYSLFGDVISFDTTYRTNKYSMIFAPFTGINHHRQSVTFGAAFLVDEKSDSA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03316 305 PANTHER OS01G0519700 PROTEIN 21 302 - -
Trre1g03316 305 Pfam MULE transposase domain 261 303 IPR018289 -
Trre1g03316 305 Pfam FAR1 DNA-binding domain 46 140 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03316 Trre-Chr1 29373211 29374128 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre1g03316 FAR1 1.2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03316 - - mtr:112420857 359.377