Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03255 ATGGCTAAGGAACAGTTGAAGGTGCTTAATGCACTTGATGTTGCCAAAACACAATGGTATCATTTTACTGCAATTGTGATAGCTGGAATGGGTTTTTTCACTGATTCCTATGATCTCTTCTGCATTTCCCTTGTCACGAAATTGCTCGGCCGTGTTTATTACTACAAAGGCGGTAACAATCCGGGTTCTCTGCCACAAAATGTTTCGGCTGCAATCAATGGTGTTGCCTTCTGTGGAACACTAGCAGGACAACTTTTCTTTGGTTGGCTTGGTGACAAAATGGGAAGAAAACGTGTTTATGGAATGACACTTATGCTTATGGTCTTATCTTCACTTGCTTCTGGTCTATCTTTTGGGAAAGATCCCAAAACTGTTGTGTCTACTCTTTGTTTCTTTAGGTTTTGGCTTGGATTCGGAATCGGTGGCGATTACCCTCTTTCGGCTACAATTATGTCTGAGTATGCAAATAAAAAGACTCGCGGCGCTTTTATAGCAGCTGTGTTTGCTATGCAAGGTTTCGGAATTTTGGCTGGTGGCGCGGTTGCAATCATAGTTTCGTCTATTTTTAAAGCTTTGTATCCTGCTCCGGCGTTTCAAGTTAATCCTTTTTTGTCGACGGTTTCACAAGCTGATTATGTTTGGAGGATAATCTTAATGTTCGGCTCAATTCCTGCATTGCTTACATACTATTGGAGGATGAAAATGCCCGAAACTGCGCGATACACTGCCTTGGTTGCCAAGAATACTAAACAAGCTACTGCAGATATGTCAAAAATTTTGCAAGTTGAGATTGAAGCTGAACAGGAAAATGTTCAGCAATTGGATCAAACACAACGACAGAGTAATGAGAATGATTTTGGTTTGTTTACAAAAAGGTTTCTTCGCCGTCACGGACTTCATTTGCTTGGAACAGCCATTACATGGTTCTTATTGGATATTGCTTATTATAGTCAGAATCTTTTCCAGAAAGATATTTTTAGTGCAATAGGATGGATACCAGAAGCTAAAACCATGAGTGCCCTTGAAGAGGTTTATAAAATTGCTAGAGCACAAACTCTAATAGCCCTTTGCAGCACTGTTCCTGGTTATTGGTTCACGGTGGCGTTGATCGATAGAATCGGAAGGTTTACAATTCAGTTAATGGGATTTTTCTTCATGACTGTGTTCATGTTTGCATTGGCTATTCCATATCATCATTGGACTACAAATGGAAACCAAATTGGATTTGTTGTCATGTATTCATTGACATTTTTCTTTGCAAATTTCGGTCCAAATGCAACGACGTTTATTGTTCCAGCCGAGATTTTCCCGGCAAGGTTAAGGTCAACATGTCATGGAATATCAGCTGCTGCTGGAAAAGCTGGTGCAATGGTAGGTTCTTTTGGTTTCTTATATGCTCAAAATGCTATTGGAGTGAGAAATGTGCTTCTGCTTTTGGGTGTGGCCAACTTTTTGGGGATGATGTTTACATTCTTGGTGCCTGAAACTAAAGGAAAATCTTTGGAAGAGATTTCTGGTGAAGCTGATGAAAAAACAAGTACTAATAGAGAATCTGCATTGGAGGCTGGTCTTCAAGTTTAG 1581 0.401 MAKEQLKVLNALDVAKTQWYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRVYYYKGGNNPGSLPQNVSAAINGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVLSSLASGLSFGKDPKTVVSTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGAVAIIVSSIFKALYPAPAFQVNPFLSTVSQADYVWRIILMFGSIPALLTYYWRMKMPETARYTALVAKNTKQATADMSKILQVEIEAEQENVQQLDQTQRQSNENDFGLFTKRFLRRHGLHLLGTAITWFLLDIAYYSQNLFQKDIFSAIGWIPEAKTMSALEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFTIQLMGFFFMTVFMFALAIPYHHWTTNGNQIGFVVMYSLTFFFANFGPNATTFIVPAEIFPARLRSTCHGISAAAGKAGAMVGSFGFLYAQNAIGVRNVLLLLGVANFLGMMFTFLVPETKGKSLEEISGEADEKTSTNRESALEAGLQV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03255 526 Coils Coil 257 284 - -
Trre1g03255 526 MobiDBLite consensus disorder prediction 503 526 - -
Trre1g03255 526 Gene3D MFS general substrate transporter like domains 275 522 IPR036259 -
Trre1g03255 526 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Trre1g03255 526 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 498 IPR020846 GO:0022857
Trre1g03255 526 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 502 - -
Trre1g03255 526 FunFam Inorganic phosphate transporter 1-6 20 519 - -
Trre1g03255 526 SUPERFAMILY MFS general substrate transporter 12 505 IPR036259 -
Trre1g03255 526 CDD MFS_PhT 25 497 - -
Trre1g03255 526 Pfam Sugar (and other) transporter 25 505 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre1g03255 526 NCBIfam phosphate:H+ symporter 11 507 IPR004738 GO:0005315|GO:0006817|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03255 Trre-Chr1 28683143 28684723 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03255 1 506 Inorganic Solute Cotransporters AT2G38940 75.769 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03255 K08176 - gmx:100802365 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03255 1 28683143 28684723 Trre1g03255 1 28683143 28684723 ECH