Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03213 ATGATCTTAGCCCAAGTGGGCTATACCTTTGTATATTTCATCACTGAAGCTTCCTTCAACCATGGAATGAGTCCTTATGTTTATGTTACATATCGGCACGTCGTTGCCGGGGTTGTGATGTTCCCTTTTGCATACTTTCTAGAGAGAAAAGTAAGGCCAAAGCTGACATTTGCTCTTTTTATGGAAATTTTTTTGCTTTCAGTGTTGGGGATAACTTTGTCTCTCAATTTATACTTTGCAAGCTTAAAGTATACTTCTCCAACCTTTCTTGCTTCCATGTACAACACCGTATCATCCCTCACCTTCATTATTGCAGTGGCACTCAGGTTTGAGATTGTTGATATTAGAAATCCACGTGGCATAGCAAAAGTACTTGGGACAATAATCTCCTTAGCGGGTGTTATGACCATGACACTATACAAGGGACCTATGATGAGAAATTTGTGGCATCCTCTAATCCATATTCAACCAAAAAGTGCTTCTATCACTGAGGGAGGGTTAAGGGGTTCACTCCTTACCGTTTCAAGCTGTTTTACATTGTCTATGTGGTACATTATGCAGGCATCCACTTTGAAAAGATACCCCGCTCAATTATCACTCACTACATGGATGTGCTTTATTGGAGCAGCACAATCAGCTGTTTTTACAGTGATAATAGAACACAATAACCCTTCAGCATGGATTATAGGGATCAATATTGACTTGTGGTCCACAATATATGGGGGAATTGTTGTTGGTGGAATGTTGATGTACATTCAACTATGGGGCACTGAGAAAAAAGGGCCAGTTTTTGTCACAGTCTTTAACCCTCTTTGTACCATATTTGTGGCAATTTTAGCATACTTCGTCCTTGGTGAAAAGCTTTATTTGGGCAGCATCATAGGTGCATTTATTGTCATTATGGGTCTGTATTTGTTGCTGTGGGGTAAAGAAGGTGACAAAGAGGTTGATTTCAAGACCAAACAATCCACTAGTGATGACCAAGAATGCAGAGTGTAG 999 0.4004 MILAQVGYTFVYFITEASFNHGMSPYVYVTYRHVVAGVVMFPFAYFLERKVRPKLTFALFMEIFLLSVLGITLSLNLYFASLKYTSPTFLASMYNTVSSLTFIIAVALRFEIVDIRNPRGIAKVLGTIISLAGVMTMTLYKGPMMRNLWHPLIHIQPKSASITEGGLRGSLLTVSSCFTLSMWYIMQASTLKRYPAQLSLTTWMCFIGAAQSAVFTVIIEHNNPSAWIIGINIDLWSTIYGGIVVGGMLMYIQLWGTEKKGPVFVTVFNPLCTIFVAILAYFVLGEKLYLGSIIGAFIVIMGLYLLLWGKEGDKEVDFKTKQSTSDDQECRV 332
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03213 332 PANTHER WAT1-RELATED PROTEIN 1 320 IPR030184 GO:0016020|GO:0022857
Trre1g03213 332 Pfam EamA-like transporter family 14 137 IPR000620 GO:0016020
Trre1g03213 332 Pfam EamA-like transporter family 168 307 IPR000620 GO:0016020
Trre1g03213 332 SUPERFAMILY Multidrug resistance efflux transporter EmrE 203 310 - -
Trre1g03213 332 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 141 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre1g03213 Trre-Chr1 28164096 28167632 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03213 1 331 Nodulin-like Gene Family AT5G07050 41.499 6.02e-92 278