Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03159 ATGAGTACAAGCAGGTTGACAGTGCTCTTTCCAGACTTTGAAGTTTATATTATGTTTTGCATCGGCATGGCATGTATAGTTTTCTTCACTCTCTTCTGCATCATCCCAATAATAGCATTAGCTTATGCTTTAAGAATCAGGGAAGGTGCTTCAGAAGATGATATCAGGTCACTTCCTATGTATAGGTTTAGTCGGTCAAATGTAATGGTTATGATTGATGACAACCAGAAGCAATTTGTTGAAGCAAGAACCGGTTCATACAATCAAAGCCATATTAGTGAACTATCTCTTCGTCCAGATGATTCTGAATGCTGTATCTGCCTATGA 327 0.3823 MSTSRLTVLFPDFEVYIMFCIGMACIVFFTLFCIIPIIALAYALRIREGASEDDIRSLPMYRFSRSNVMVMIDDNQKQFVEARTGSYNQSHISELSLRPDDSECCICL 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03159 108 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03159 Trre-Chr1 27493391 27498306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03159 6 108 C3H Transcription Factor Family AT1G68070 40.000 5.31e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03159 - - tpra:123888220 179.104