Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03154 ATGGTTAGAATCTCCAAATTTATGTTATTAGTTTCTATGTTACTAACAATTCTCATTGCATTGCAGTTTAAGGATAGCAAAAGCTTTGGAGTCTTTGACAAAGGAACTGTGACCATTACTAACAAATTGGCCAATAACGACCAACTCGGTGTTGATTGCAAAGACAAACATCATGATTATCAGTTCAAAACACTGCGTTTTGGCGAAAATTACACTTTCACTTTTGATCCTTCATTTTTTGGAAGATCTTTATATTTTTGTAGTTTTTCATGGATTAACGGATTTCACTATTTTGACATTTATGTTCAAAAACGAGACCAAGATTGCGACAAATGTAATTGGATAATAAAAGATTCAGGACCATGTAAGCTTAAAGATGGTGGCTCTATTGATTGCTTTCAATGGAATCCTAATGTTGTTATGTGA 426 0.3286 MVRISKFMLLVSMLLTILIALQFKDSKSFGVFDKGTVTITNKLANNDQLGVDCKDKHHDYQFKTLRFGENYTFTFDPSFFGRSLYFCSFSWINGFHYFDIYVQKRDQDCDKCNWIIKDSGPCKLKDGGSIDCFQWNPNVVM 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03154 141 Pfam Plant self-incompatibility protein S1 36 135 IPR010264 -
Trre1g03154 141 PANTHER - 32 125 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03154 Trre-Chr1 27450785 27451210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03154 13 136 Carbohydrate Esterase AT3G16970 35.294 8.15e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03154 - - cam:101507265 161.384