Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03153 ATGGCAGAGCATCAACCTCCATCACAAATAACAACAATGGCTTCCTCTCCACCGCATCTTTCTTCCACCTCCATCACAACCACCTCTCCACCACCTCCCTCATCCTCTATCACCACATCAACATCTCCACAACAAACCCAACTCTCCTCACCACCTCCCTCCTCTATCACCACAATAATCTCTACACAAGAAACACATTCATCTTCACCACAAACATTACAAACACACTCTCAACCACAAACACAATCTCATTTATCTTCCACATCAGCACCATTTCTTACACCACCACCAACAGCTTCTACTGAAATTCAACCTTCATCTTTAACACCACCACCATCTTCCACCCTTACTCCACAACCATCATCTGATGATCCTTCTGCTTCTGCAAGTCAACAAGTCATCTTGGAGAATCAGCCGACTCAACCTCAAGTTTTGATAGTGGAGCAGCAACAACAGCTCCAACATCAAAACTTGATCCAAAACCAACAACTGCAAAATCAAAATTGGAAACAAAGGGTCAAACCCTTTGCAATTGTGATATTATTGCAAATTTTATTTGCAATAATGAATATTTTAACAAAATTAGCCATGAACAATGGCATGAGCAATTTTGTTTTTGTGTCTTATCGCAATATCATTGCATTTTTAGTCATATCACCATTTGCCATTTATCACGAAAGGGATCGATGGCCAGAAATGACATTTTCAGTATTCATGAAGATATTGGCCCTCAATGTGCTCGGACCTATTATGGATCAAGATTTGTACTTCTTAGGGATGAAGTACTCAACGGCAACTCTTGCAACCGCCTTGAGCAATACTCTTCCTGGAATGACCTTTGTTTTGGCTTATATTACCGGGAGAGAAAATGTAGACATAACTTCTAAACCAAGCCAAGCAAAAATATTGGGCACAATCATAACTGCTTTAGGTGCCACGGTAATGACTCTTGTTAAAGGTCCAATCCTATTTGGGACGGTTGAAGCCAACACTCATATTCATCATCATGATGGTTTCCATACAATTCTTGGAGTGGTGTTCATCTTGTCATCAACTCTAAGTTCTGCCTTTTCTAATATCCTCCAGACTAGCACTCTAAGCGAGCTGAACCTACCTTGGTCTGTTTTTGAGTTGGATATCAAATTGTTGGCAGCTATTTACGCAGGCATATTTTGCTCAGGGCTAGGTTTCTACTTGCGAGGACAAGTGATGCAAGCTAGAGGTCCTGTGTTTGGAACAATGTTTAGTCCCGTGTGCATGATACTTGTTGCTACGTCGAGCTACGTATTTCTTGACGAGGAGCAATTATTAGGAAGAGTGATAGGTGCACTAATCATCTGTTTGGGTCTCTACTGTGTTGTATGGGGAATCAACAAAGATAACAACCTTAGGCGACAAGAGAATGCAAACGCAGTGGCAAATCCATAG 1428 0.4132 MAEHQPPSQITTMASSPPHLSSTSITTTSPPPPSSSITTSTSPQQTQLSSPPPSSITTIISTQETHSSSPQTLQTHSQPQTQSHLSSTSAPFLTPPPTASTEIQPSSLTPPPSSTLTPQPSSDDPSASASQQVILENQPTQPQVLIVEQQQQLQHQNLIQNQQLQNQNWKQRVKPFAIVILLQILFAIMNILTKLAMNNGMSNFVFVSYRNIIAFLVISPFAIYHERDRWPEMTFSVFMKILALNVLGPIMDQDLYFLGMKYSTATLATALSNTLPGMTFVLAYITGRENVDITSKPSQAKILGTIITALGATVMTLVKGPILFGTVEANTHIHHHDGFHTILGVVFILSSTLSSAFSNILQTSTLSELNLPWSVFELDIKLLAAIYAGIFCSGLGFYLRGQVMQARGPVFGTMFSPVCMILVATSSYVFLDEEQLLGRVIGALIICLGLYCVVWGINKDNNLRRQENANAVANP 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03153 475 MobiDBLite consensus disorder prediction 1 130 - -
Trre1g03153 475 Pfam EamA-like transporter family 178 316 IPR000620 GO:0016020
Trre1g03153 475 PANTHER WAT1-RELATED PROTEIN 373 461 IPR030184 GO:0016020|GO:0022857
Trre1g03153 475 SUPERFAMILY Multidrug resistance efflux transporter EmrE 378 456 - -
Trre1g03153 475 MobiDBLite consensus disorder prediction 1 110 - -
Trre1g03153 475 SUPERFAMILY Multidrug resistance efflux transporter EmrE 209 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03153 Trre-Chr1 27422921 27426399 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03153 162 460 Nodulin-like Gene Family AT2G37460 42.598 1.24e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03153 - - tpra:123889652 476.478