Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03138 ATGGGGAAATACATGAAAAAATCTAAACCTAAATCTGAATTAACGTTGGTTGATTCCACCAGCACCACTTACTTAGGTGTTCGAACTCGTGCAAAAACCCTGGCTCTTCAAAAATCAAATCCTCAGAATCATGATCTTTCTCTTTCTGCTGATTCTTATCTTCAGCTTCGAAGTCGTCGACTGTATAGATCCCCAATTGCTCAACATTCTAATAAGAAAGAGAAGAATAAGCCCCAAATTCAAAATCCTAAATCACCAAATGGTGATTGTGGTAGTGAGGAGAAACCTGTTCAACAGAGTTCTAATGTTGAAGATGCTTCTTTTGCGGAAAATGTATTGGTTTCTGAAGGTAGAGAGAGAAGCACTAGGGAAACAACACCTGACCATTTGATAAGGGTCCCAAACACTGTCAGGACTCCTAGTTCATCTACCAAGCGTACTTTTCCAACTGAAGCTCATCGTGGTCCGGAGCAAGCATCTAGATCTGTGACCATGTCTATGCAGAAATTTGATGAATTCTATGCTAAACACGAAGCTGCTGAGCAAAAGGCGTTCATGGAGAAGTACAACTTTGATCCTGTGACAGAGACGCCACTCCCCGGGCGCTACGAATGGGAAAAAATGACACCCTAA 633 0.4186 MGKYMKKSKPKSELTLVDSTSTTYLGVRTRAKTLALQKSNPQNHDLSLSADSYLQLRSRRLYRSPIAQHSNKKEKNKPQIQNPKSPNGDCGSEEKPVQQSSNVEDASFAENVLVSEGRERSTRETTPDHLIRVPNTVRTPSSSTKRTFPTEAHRGPEQASRSVTMSMQKFDEFYAKHEAAEQKAFMEKYNFDPVTETPLPGRYEWEKMTP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03138 210 Gene3D p27 137 210 IPR044898 -
Trre1g03138 210 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 208 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre1g03138 210 PIRSF CKI_KRP_plant 1 210 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre1g03138 210 MobiDBLite consensus disorder prediction 80 108 - -
Trre1g03138 210 MobiDBLite consensus disorder prediction 135 149 - -
Trre1g03138 210 MobiDBLite consensus disorder prediction 59 163 - -
Trre1g03138 210 Pfam Cyclin-dependent kinase inhibitor 168 207 IPR003175 GO:0004861|GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03138 Trre-Chr1 27300639 27303429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03138 1 210 Core Cell Cycle Gene Families AT5G48820 36.214 6.01e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03138 - - gmx:100781000 212.231