Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03137 ATGGGGAAATACATGAAAAAATCTAAACCTAAATCTGAATTAACGTTGGTTGATTCCACCAGCACCACTTACTTAGGTGTTCGAACTCGTGCAAAAACCCTGGCTCTTCAAAAATCAAATCCTCAGAATCATGATCTTTCTCTTTCTGCTGATTCTTATCTTCAGCTTCGAAGTCGTCGACTGTATAGATCCCCAATTGCTCAACATTCTAATAAGAAAGAGAAGAATAAGCCCCAAATTCAAAATCCTAAATCACCAAATGGTGATTGTGGTAGTGAGGAGAAACCTGTTCAACAGAGTTCTAATGTTGAAGATGCTTCTTTTGCGGAAAATGTATTGGTTTCTGAAGGTAGAGAGAGCAGAAGCACTAGGGAAACAACACCTGACCATTTGATAAGGGTCCCAAACACTGTCAGGACTCCTAGTTCATCTACCAAGCGTACTTTTCCAACTGAAGCTCATCGTGGTCCGGAGCAAGCATCTAGATCTGTGACCATGTCTATGCAGAAATTTGATGAATTCTATGCTAAACACGAAGCTGCTGAGCAAAAGGCGTTCATGGAGAAGTACAACTTTGATCCTGTGACAGAGACGCCACTCCCCGGGCGCTACGAATGGGAAAAAATGACACCCTAA 636 0.4198 MGKYMKKSKPKSELTLVDSTSTTYLGVRTRAKTLALQKSNPQNHDLSLSADSYLQLRSRRLYRSPIAQHSNKKEKNKPQIQNPKSPNGDCGSEEKPVQQSSNVEDASFAENVLVSEGRESRSTRETTPDHLIRVPNTVRTPSSSTKRTFPTEAHRGPEQASRSVTMSMQKFDEFYAKHEAAEQKAFMEKYNFDPVTETPLPGRYEWEKMTP 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03137 211 Gene3D p27 139 211 IPR044898 -
Trre1g03137 211 MobiDBLite consensus disorder prediction 136 150 - -
Trre1g03137 211 Pfam Cyclin-dependent kinase inhibitor 169 208 IPR003175 GO:0004861|GO:0005634|GO:0051726
Trre1g03137 211 MobiDBLite consensus disorder prediction 80 108 - -
Trre1g03137 211 MobiDBLite consensus disorder prediction 59 164 - -
Trre1g03137 211 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 209 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre1g03137 211 PIRSF CKI_KRP_plant 1 211 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03137 Trre-Chr1 27300639 27303429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03137 1 211 Core Cell Cycle Gene Families AT5G48820 36.626 1.03e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03137 - - gmx:100781000 207.608