Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03119 ATGTACAATTGCAGGGCTCCATTGGGACAAGATGCTGAAGAAAAACCAAAATATGTTATACGTCCGTATACCCCTATATCAGATCCAGAATCCAAGGGGTATTTTGATTTGTTAATCAAGGTGTATCCTGAAGGAAAAATGAGCCAGCATTTTGCAAGCTTAAAACCAGGTGACGTGGTTGAAGTGAAAGGGCCCATTGAAAAGTTCAGATATACTCCTAATATGAAGAAGAGCATTGGCATGATTGCCGGTGGCTCAGGAATTACTCCTATGCTTCAGGTAATTGAGGCTATATTGAAGAATTCTGACGACAAAACTCAGATATCATTGATTTATGCTAATGTCTCCCCAGATGACATACTGCTTCAACAAAAGCTTGACATTCTAGCAACAAGCCACCCAAACTTAAAGATATTCTACACTATAGACAATCCAACAAAAAATTGGAAAGGAGGTGCAGATGATCCAAATGAACCTGAATCATCTCAGAATGCTATTCCTCTTCCTCCTCCACCCATTTCTAACCATCAATTTGAGCAAATTAGTCGTAATATCTATAGAAAGGTTAAGGCCTTGCACAAAATCAGGTATTCTCTTATCTCACCCAAAGCCTGTATCTTGGCTTGGGATAGTGTCAGAACTGAGATTGTGGATGCTGTGTATAACTTGCTTGATGGGGATCTGGAGGAAATGGTACAGTTTCAGAGGAAGGTACAAGCATGGATGGATCAAGTTAAACAGGGTTATATGAGGCTGCCAGAAAAGGAAGCTCATCACTGGCAAGAAGATTATCTCAGAGAACGAGTTGGCTTTTTGGATAGTGCTATTTCTAGGCATCTGAGATGCTCCTTAACTCCTGGGGCTATGTTTGTTTCGAAGGATATTGTGGAGTCATCTATCACTGCTTCAGAACTAGCCGATGTTAAGAAAGAGCTTGCTGAATTGAATGCTAAGTTTGATCGTATAGTGGCTAGGCAGGATGCCATGGATGCTAAACAAGATGAGAAGTTTGAGCGCTTGGAAGCCAATTGGAATCCTGTAGGGGCCACCCGAGCTGGGCGCAATCCTGCCACTTACAAAGACCATGGCAAAACTGTACATATTGATGGTAAGCTTTCAATAAACTGGGAATATAATTCCATGACAGCAACAAGCATGATTATATTTTCTATTCCTTTTTTGAACTGTCTTGACATATTTCTGTAA 1206 0.4071 MYNCRAPLGQDAEEKPKYVIRPYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKFRYTPNMKKSIGMIAGGSGITPMLQVIEAILKNSDDKTQISLIYANVSPDDILLQQKLDILATSHPNLKIFYTIDNPTKNWKGGADDPNEPESSQNAIPLPPPPISNHQFEQISRNIYRKVKALHKIRYSLISPKACILAWDSVRTEIVDAVYNLLDGDLEEMVQFQRKVQAWMDQVKQGYMRLPEKEAHHWQEDYLRERVGFLDSAISRHLRCSLTPGAMFVSKDIVESSITASELADVKKELAELNAKFDRIVARQDAMDAKQDEKFERLEANWNPVGATRAGRNPATYKDHGKTVHIDGKLSINWEYNSMTATSMIIFSIPFLNCLDIFL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03119 401 CDD cyt_b5_reduct_like 12 152 - -
Trre1g03119 401 Pfam Oxidoreductase NAD-binding domain 81 152 IPR001433 GO:0016491
Trre1g03119 401 PANTHER NADH-CYTOCHROME B5 REDUCTASE 14 153 IPR001834 GO:0016491
Trre1g03119 401 PRINTS Cytochrome B5 reductase signature 57 71 - -
Trre1g03119 401 PRINTS Cytochrome B5 reductase signature 80 99 - -
Trre1g03119 401 PRINTS Cytochrome B5 reductase signature 21 28 - -
Trre1g03119 401 PRINTS Cytochrome B5 reductase signature 118 129 - -
Trre1g03119 401 Gene3D - 64 181 IPR039261 -
Trre1g03119 401 MobiDBLite consensus disorder prediction 149 173 - -
Trre1g03119 401 Pfam Oxidoreductase FAD-binding domain 15 71 IPR008333 -
Trre1g03119 401 Coils Coil 305 325 - -
Trre1g03119 401 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 59 155 IPR039261 -
Trre1g03119 401 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 1 72 IPR017927 GO:0016491
Trre1g03119 401 SUPERFAMILY Riboflavin synthase domain-like 15 74 IPR017938 -
Trre1g03119 401 Gene3D Translation factors 2 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03119 Trre-Chr1 26965067 26969132 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03119 3 174 NADPH P450 reductases AT5G17770 44.262 7.09e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03119 K00326 - gmx:100819222 279.641