Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03046 ATGAACAATATGGCTTCTCAACCTCCAATAATAGGTAGTAGTAGTAAGCTTCAAAATATGTTGCAGGCTGCAGTGCAATCTGTTCAATGGACTTATAGCCTCTTCTGGCAACTTTGTCCACAACAAATGATTCTGGTATGGGCTGATGGATATTACAATGGAGCAATTAAGACAAGGAAGACAGTGCAACCAATGGAGGTAAGTGCAGAGGAAGCATCTCTACAGAGAAGCCATCAACTAAGAGAGCTGTATGAATCATTATCCGCCGGAGAGACGAACCCGCCAACTCGCCGGCCTTGTGCTTCCTTGTCGCCAGAGGACCTAACAGAATCTGAGTGGTTCTACTTGATGTGTGTCTCTTTCTCTTTTCCTCCTGGTGTCGGGTAA 387 0.4522 MNNMASQPPIIGSSSKLQNMLQAAVQSVQWTYSLFWQLCPQQMILVWADGYYNGAIKTRKTVQPMEVSAEEASLQRSHQLRELYESLSAGETNPPTRRPCASLSPEDLTESEWFYLMCVSFSFPPGVG 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03046 128 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 17 127 IPR025610 -
Trre1g03046 128 PANTHER TRANSCRIPTION FACTOR TT8 12 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03046 Trre-Chr1 26205002 26206256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03046 16 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 71.681 2.62e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03046 - - cam:101506726 232.261