Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre1g03021 | ATGAGAGAAGGGTTGAGATCTCGGACTCGGTTGGGGAAGGGTTCTGGTGAAGGAGAAGTTGTTCACAAGAAAAGGGTTCGTGTGAAGAATGAGGTTTTGGTGGAACGTACGCAGGCCGTAGTTGAGGCTTTATTTTCAGGTGATGAGGGTTTAGTGGAACCTACATCATTGATTGAGAAGAAGGGTGAAACTGAGGCATTGGTTTCGGGTAACGAGGGTTTAGTGGAGCCTACTGCATTGATTGAGAAGAAGGGCGAAACAGAGGCTTTAGTTTCGGGTGGCGACGGTTTAGTGGAGCCTACTGCATTGATTGAGAAAAAGGGCGAAACAGAGGCTTTAGTTTCAGGTGATGAGGGTTTAGTGGAGCCTACCTCATTGATTGAGAAGAAGGGTGAAGTTGAGGCTTTATTTTCGGGTGATGAGGGTTTAGTGGAACCTACCTCATCAATTGAGAAGAACGGTGAAACTGGGGCTTTAGTTTCGGGTGATCAAAGTTTAGTGGAGCCTACCTCATCAATTGAGAAGAAGGGTGAAACTGGGGCTTTAGTTTCGGGTGATCAAAGTTTAGTGGAACATACCTCATCTATTGAGAAGAAGGGTGAAGTTGAGGCTTTAGTTTCGTGTGATGAGGTTTTAGTGGAACCTACCTCGTCGATTGAGAAAAAGGGCGAAGTTGAATGTGCAGGCGTTGTTGAGTGCGCTGGTGAAGTTGAATGTGATGTGAAAACAAAATTTGATTTTGATTTAAACCTGAGTTTGAGTGTAAATGTTGACATAGATGAAAATAACATAGACGAGAATTGTAACAGTAGTCCTAGGAGTTGTTTAAAAGATGGGCATAGTATTGCGGAAGCTGATAAGAAGGAGAATGAAGGGTTGAGTGGGGGTCGAGTATTGCGGTCCAGGTTAAAGAGGGGAGATGACAGAAGAGCTTATGCAGGGAATAATGGAGAACATGGTCGATTGGAGATGATACAAGTCAAGAATGAGCTTGAAGAAGTTGATGAGGTTTTGACTGATGGTAAAAAGAATGATAGGGTTAGTATGAACATGGGAGGGAAGGGAAAGAAGAAATTGAAACGGAAGCGCGGGAGGCCTCCCAAGACAGAAATAAAAGAGAAAGATCAATTAGATTATCAGCCACCGCGTAAGCTTGGGAGGCCTCCGAAAAGAGAAATAAAAGAGAAAGATCAATTAGATGATGATCAGCCACCATGTAAGCTCAGGAAGCCTTGTAGAACAGAGTTAAAAGAGGATGATCAGTCACCACGTAAGCTTGGTAGGCCTCGCAAAACAGAGTTAAAAGAGGATGTTCAGTCACCGCGTAAGCTTGGGAGGCCTCGCAAAACAGAGTTAAAAGAGGATGTTCAGTCACCGCGTAAGCTTGGGAGGCCTCACAAAACAGAGTTAAAAGAGGATGTTCAGTCACCGCGTAAGCGTGGAAGACCCCCCAAGACCGAGGAACAAAAACATCTCATGATCCTGGCACATAATAGTAAAGGAAATGTGAGCCGTGAAGATGGTAAAAAAGTTGTAACTGTAACTGATAGTACAAGTGAAAGTGAAGTTGATGATACACGCTCAAGGAGATCTTCCAGTAAAAAGTTAAAAAAGAAAGGATTTTCTTCTGTAAGGAAAAATAAATTGCGAAAGGTTTTGAAAACTGAGAATGGTGGGATGGCATCAAATACTGTGAATGCACCTGTTGCTAAACAAAGTAAAAGGCGCGAAGAAAAGAAGTTGGTGAGGGATAAAATCATGGAATGTCTCTCGGATGCAGGATGGACTGTTGACCGCAGACCTAGAAATGGAAAAGTTTATCTTGATGCAGTATATGTTTCTCTGGACGGAAAGACACATTGGTCAATAACCTTGGCATACAAGAGGCTTAAAAAGCATTATGAAGCTGGGGACGGTGAAGGTAAGTTGTACAGACCAGGATTCAAATTTACACCAATATCACAGGAAGATTTCAATTCACTAACTAGAGTAGTTACCAAGACCAGGATAGATAAAGTTAAATGTGTTCCATTTGGAGGAAAGGATGGAAAGAGAGTTGATGGAGTCAATCGAAAAAAGAAAAAAATAAAACCAGGTTCTGGTGCAGGCAGGGGTAAGTTAGTGAAAGGGAAAAAGAAAAGGAAGCGATCACTTCCTGAGGAGGGCAAAACAAATGTTACATCACCTAACAGGGATCGTAAACGGAACAAAACACAGAACAAGGCCAGATGTGCTCTGTTGGTTCGTGATGCTACAGAGGAGGTAGATTCAGAAGTTAATGGATATGTGCCATACAGTGGAAAACGAACTGTACTTGCTTGGATGATTGATCTGGGTACAATCCTCCAAAATGGGAAGGTCCATTATATGCAAGATAGGTCGGAAATTGCTTTCGAAGGTAAGATCACAGGAGATGGCATTCACTGTGGATGCTGTAATGAAATCATAACAATTTCAGACTTTGGAGCTCATGCAGGAAGCAAATCGGATCCTCTGAAAAATATATATACAGAGGAAGAAACTTCACTCCTACAATGCCTGCTAGATTCATGGAATAAACAAGATAAATCTGAACTTAAAAGTTTTCACTTCGTTGATGTTGCGGGTGAAGATCCAAATGATGATACATGTGGTGTCTGTGGAGATGGTGGAGATCTGATCTGCTGTGATGGTTGCCCTTCAACATTCCATAAAAGCTGCTTGGATATAAAAAAGTTCCCATTTGGTGACTGGCACTGCATTTATTGTTGTTGCAAATTTTGTGGGTTGGTTGATAGAAGTTCAAACCAAACTGTCGTCAATGATGATTTTACTATGCCTGCACTGCGCACATGCCATTTATGTGAGGAAAAATTTCACATATCCTGTATTGTGGCAAATGGTGAAAAGACCGATGATTCCAGGGTGGTAAATGGTGATAAAACCGATGATTCCAGGAATACATTTTGTGGAAACAAATGTCAAGAGTTATCTGAGAGACTTGAAATGCTTCTTGGGGTTAAACATGAAATTGAAGATGGATTTTCTTGGTCTTTTATTCGGCGGTCAGATGTTGGCTTTGATGTTTCCCTGACAAAATCTCAGACGGTAGAATGTAATTCTAAGCTGGCTGTTGCATTATCAATAATGAATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGGACCAATCTGATCCGCAGTATTCTATATAATTGTGGGTCAAACTTCAAACGGCTAAACTATAGTGGGTTTATTACTGCAATTCTAGAGAGAGGTGATGAGATCATCTGTGTCGCATCTATCAGGATCCATGGCAACCAACTTGCAGAGATGCCATTTATTGGAACCCGCTATATGTACAGGCGACAAGGAATGTGCCGTCGGCTTCTCAATGCCATCGAATGGGCACTCAGTTCTTTACATGTTGAGTTATTGGTCATACCAGCTATATCAGAACTCAGAGAAACCTGGACCTCCGTTTTTGGGTTTGAGCCACTTGAAGAAACAAGCAAGCAAATAACAAAGAACATGAATCTGTTGGTATTTCCACATGTAGATATGTTACAGAAGAAGATATCAATGCATGAAATTGCTAATGAAAATTTGATTGCTACTGAAGTTTCTGACCATAAGAATCTTGCGACATACAAAGTAGCAATTCGGGATGGGGAAGACTCATCTGTATCTGATTGTTGCCCTAAAAACGAGAAAACCATATCTATTGACACCATACAGAATAGCATGTCTCCAAAAGACGGCAAATGTCATGCTGTATATGAGACTGTTCATGAAAAATTGGGCGTGGACCACAAAAGCACTGTAAATGCTGGTGAGGATGTCGCTAAGTCTTGTTGCCAAGTAGAGGATAAGGAAAGATACTGTCTGAGTACATCTTGTATTAACACTGAAACTTCACAAGAACATCACGTTGGTGCTATGTTGGAGGTTACTGAAAATTGTTCCAACGAGGTCAAAGTAACAGTTGATGTTGGTTTAAATAACAACAGTGATGAAAAATCTGCACCCTCCGCTGAAGAAAATATCCCTATTAACTCACATATTGAGTTTAGGACAAGGGGATCAAAATATTCTGCTGAAAGTAACCATGATTCACCCAAGATTTCTGATAGTTTTGAACTGAGATGTAAGACTAACTGTGCTCAACCGGGAGATCTTGCTGAATCTGTCAATGGTTGTGGCTCTAGACTAGATGGTGATAGTGCCACTGGTGAAGCAGGTCTCAAAACCAACATCTTGATGCATGTTGAATCAGAGAATACGACCAAAGATTTGCCTGCTAGTTGTGAAAACTATTCGAGTGCTGTTAGTGCGCCAAATGCTGATGAAGCTGAACTAGATTCCAAAACAATTGATCTCCAGACAAACAAAACTCTTGGAGATTGCCAATCTATTCTAGTATCTTCAGGTATTTGTGAGAAAATTGCATATGGTGTCAATGGGATGAATAAAGCATCCAGGGAAGCTGATGCTGATATTGAAGTAATTCTTGATGATAAGCCTGGTTCCCATTCTAGACCGAATGGTCATACAGCCTCAGGCGAAGCAGGTCTTACAACTAACACTTTGATGCATCTTGAGTCTCAGAATATCACCAAAGATTTGCCTGTTAATTGTGAAAACAATTCTAGTGTTGTTGGTGCGCCAAGAATTGATCTCCAGACAAACAAAAATCCTGGAGATTGCGAATCCATATCAGTATCATCAGGTGTTTGTGACAAAATTGCAGATGGTATCAATGAGAGGAATGAAGCATCGAATGCAGATGATGTTCTTCCTGTTGATATTGAAGTGTTTCCCAATAATAAGCCTGGGATAAAGATGTCTTCAGAGCTAGCAGAACTTGATTTGCAGGTTGATCAAACTGATCTGAGTAACGCTAACATTGGTTCGGGTGCGGCTATGCACTGTATATCTACCAACAGTACTTCACGTGGTAGTACTGTAGGGACAGTTCCTGCAAACCAAGGCAGTTGA | 4980 | 0.4127 | MREGLRSRTRLGKGSGEGEVVHKKRVRVKNEVLVERTQAVVEALFSGDEGLVEPTSLIEKKGETEALVSGNEGLVEPTALIEKKGETEALVSGGDGLVEPTALIEKKGETEALVSGDEGLVEPTSLIEKKGEVEALFSGDEGLVEPTSSIEKNGETGALVSGDQSLVEPTSSIEKKGETGALVSGDQSLVEHTSSIEKKGEVEALVSCDEVLVEPTSSIEKKGEVECAGVVECAGEVECDVKTKFDFDLNLSLSVNVDIDENNIDENCNSSPRSCLKDGHSIAEADKKENEGLSGGRVLRSRLKRGDDRRAYAGNNGEHGRLEMIQVKNELEEVDEVLTDGKKNDRVSMNMGGKGKKKLKRKRGRPPKTEIKEKDQLDYQPPRKLGRPPKREIKEKDQLDDDQPPCKLRKPCRTELKEDDQSPRKLGRPRKTELKEDVQSPRKLGRPRKTELKEDVQSPRKLGRPHKTELKEDVQSPRKRGRPPKTEEQKHLMILAHNSKGNVSREDGKKVVTVTDSTSESEVDDTRSRRSSSKKLKKKGFSSVRKNKLRKVLKTENGGMASNTVNAPVAKQSKRREEKKLVRDKIMECLSDAGWTVDRRPRNGKVYLDAVYVSLDGKTHWSITLAYKRLKKHYEAGDGEGKLYRPGFKFTPISQEDFNSLTRVVTKTRIDKVKCVPFGGKDGKRVDGVNRKKKKIKPGSGAGRGKLVKGKKKRKRSLPEEGKTNVTSPNRDRKRNKTQNKARCALLVRDATEEVDSEVNGYVPYSGKRTVLAWMIDLGTILQNGKVHYMQDRSEIAFEGKITGDGIHCGCCNEIITISDFGAHAGSKSDPLKNIYTEEETSLLQCLLDSWNKQDKSELKSFHFVDVAGEDPNDDTCGVCGDGGDLICCDGCPSTFHKSCLDIKKFPFGDWHCIYCCCKFCGLVDRSSNQTVVNDDFTMPALRTCHLCEEKFHISCIVANGEKTDDSRVVNGDKTDDSRNTFCGNKCQELSERLEMLLGVKHEIEDGFSWSFIRRSDVGFDVSLTKSQTVECNSKLAVALSIMNECFMPYIDHRSGTNLIRSILYNCGSNFKRLNYSGFITAILERGDEIICVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLLNAIEWALSSLHVELLVIPAISELRETWTSVFGFEPLEETSKQITKNMNLLVFPHVDMLQKKISMHEIANENLIATEVSDHKNLATYKVAIRDGEDSSVSDCCPKNEKTISIDTIQNSMSPKDGKCHAVYETVHEKLGVDHKSTVNAGEDVAKSCCQVEDKERYCLSTSCINTETSQEHHVGAMLEVTENCSNEVKVTVDVGLNNNSDEKSAPSAEENIPINSHIEFRTRGSKYSAESNHDSPKISDSFELRCKTNCAQPGDLAESVNGCGSRLDGDSATGEAGLKTNILMHVESENTTKDLPASCENYSSAVSAPNADEAELDSKTIDLQTNKTLGDCQSILVSSGICEKIAYGVNGMNKASREADADIEVILDDKPGSHSRPNGHTASGEAGLTTNTLMHLESQNITKDLPVNCENNSSVVGAPRIDLQTNKNPGDCESISVSSGVCDKIADGINERNEASNADDVLPVDIEVFPNNKPGIKMSSELAELDLQVDQTDLSNANIGSGAAMHCISTNSTSRGSTVGTVPANQGS | 1659 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre1g03021 | 1659 | SMART | PHD_3 | 876 | 917 | IPR001965 | - | |
| Trre1g03021 | 1659 | SMART | PHD_3 | 918 | 988 | IPR001965 | - | |
| Trre1g03021 | 1659 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Trre1g03021 | 1659 | Pfam | AT hook motif | 477 | 488 | IPR017956 | GO:0003677 | |
| Trre1g03021 | 1659 | Pfam | AT hook motif | 423 | 433 | IPR017956 | GO:0003677 | |
| Trre1g03021 | 1659 | Pfam | AT hook motif | 441 | 451 | IPR017956 | GO:0003677 | |
| Trre1g03021 | 1659 | Pfam | AT hook motif | 360 | 369 | IPR017956 | GO:0003677 | |
| Trre1g03021 | 1659 | Pfam | Tify domain binding domain | 800 | 848 | IPR032308 | - | |
| Trre1g03021 | 1659 | ProSiteProfiles | Zinc finger PHD-type profile. | 874 | 919 | IPR019787 | - | |
| Trre1g03021 | 1659 | MobiDBLite | consensus disorder prediction | 366 | 494 | - | - |
Showing 1 to 10 of 29 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre1g03021 | - | - | tpra:123913713 | 2719.49 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Trre1g03021 | 1 | 25933060 | 25942588 | Trre1g03021 | 1 | 25933060 | 25942588 | ECH |
Showing 1 to 1 of 1 entries