Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03019 ATGTCAAGTACCACAAGAAATCTGAAGCACCTTGGCCTCTGCTTTTCAAATTCCATTCCTCAATCAAATTCTCCACCTACAAGTCCCACTCTTACCACTACTAGTACAGCTTCCTCACATCAACATCATCATCAAATTCATGACAAACCTCCTTCATCTACATCTTCCACATCAATTATGATCAAGAACTTCAACTCTCTCTATGACCCTTCCTTAACCTCTTCTAACCACACTTTATGCTCTTCTTCACTCTCTACCACTTTCACTACATCCACTTCTTTTGAAACCGAACCCGAACCCGAGCCAGTGGATTTCGCGGCAGCCTTTGCATCTCAACGCTTCTTCTTCTCCTCCCCCGGAAGCTCCAACTCACTAATCGAATATAAAAACACAAATATCATCCAACATTCTTCCTTACCATTGGTAGATAAGTCCAGTAGTGTTAAGCGTGAGAAGAAAGAGAAAATAGAGAAAGAGGAGGTTTTGTTCAATGGAAGTGTGGCGGTACCAACCTACTCTCCCGACCCTTATACCGATTTCAGGAGGTCGATGCAAGAGATGGTGGAAGCGCGGCCAGAGTTGATGGATGTGAGATCAAATTGGAACATCTTGCATGAGTTGCTTTTATGTTACCTTGCTCTCAACCCAAAGAACACTCACAAGTACATTCTTAGTGCTTTTGCGGATCTCCTCGTTACGCTCATGTCATTCTAG 714 0.4328 MSSTTRNLKHLGLCFSNSIPQSNSPPTSPTLTTTSTASSHQHHHQIHDKPPSSTSSTSIMIKNFNSLYDPSLTSSNHTLCSSSLSTTFTTSTSFETEPEPEPVDFAAAFASQRFFFSSPGSSNSLIEYKNTNIIQHSSLPLVDKSSSVKREKKEKIEKEEVLFNGSVAVPTYSPDPYTDFRRSMQEMVEARPELMDVRSNWNILHELLLCYLALNPKNTHKYILSAFADLLVTLMSF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03019 237 Pfam Transcriptional repressor, ovate 173 234 IPR006458 -
Trre1g03019 237 ProSiteProfiles OVATE domain profile. 169 233 IPR006458 -
Trre1g03019 237 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 43 234 IPR038933 GO:0045892
Trre1g03019 237 MobiDBLite consensus disorder prediction 16 56 - -
Trre1g03019 237 MobiDBLite consensus disorder prediction 16 40 - -
Trre1g03019 237 NCBIfam uncharacterized plant-specific domain TIGR01568 167 235 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03019 Trre-Chr1 25917631 25918344 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre1g03019 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03019 - - aprc:113871147 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03019 1 25917631 25918344 Trre1g03019 1 25917631 25918344 ECH
Trre13g03814 13 46281820 46282548 Trre1g03019 1 25917631 25918344 PCT