Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02959 ATGGAAGTTGTTGATGAGAATAGAGAACTTATTATTGAAGACAAAGAGTATGTTGTTGATTCACATGCTAACGATGATTTACATGTCAATGATTCAAATGTTGATGGAAATCAAGAACCATACATTGGAATGGAATTTGAGTCACAAGAAAATGCTTATTCATTCTATGCTCACTATGCAAAATGTATCGGGTTTGGGATTTCAATTAAAACTAGTCGTCGTTCAAGGGTTTTTAGAGAATTTATTGATGTAAAGTATGCTTGCACAAGGTATGGAAAAAAGCGAGAATCCACTGCAATTAACCCACGTCCTTGTTTGAAGGTGGAATGTGAGGCTTACTTACGTATAAAAAGAAAGTCGGATGGGAAATGGATTGTCCACGACTTCATTAAAGAGCACAATCATGAGTTTTTTCCAGCATATGCACATTATTTTCCCTGTCATAGACGGATCAATACAGCTCAAAAGAACTATATTGAAACTTTGCAAAATGTCAGAGTGAGAACAACCAAAATTTATGCAACAATGGCCAAACAACATGGAGCGATTGAATTTATCGAGGAAGGGTCGTTAAGTCATGAGAGTTACAATTTTGCATGTCATGCACTTGGTGAAGCCTTGAAACAATGTGCCACTATTAATCAATCTTTGAAAATTGACAAGGAAAATATTGGTAAGAACAAATTGGGTGATACACCACTACTTGATCCTCGACCATCAAAAACAAAAGGGGCTCCATCACAGAGAATGAAAAGTGGGATCGAAAAAGGGCGTAAGAGACGTAAAAAGGAAAACTGA 798 0.3647 MEVVDENRELIIEDKEYVVDSHANDDLHVNDSNVDGNQEPYIGMEFESQENAYSFYAHYAKCIGFGISIKTSRRSRVFREFIDVKYACTRYGKKRESTAINPRPCLKVECEAYLRIKRKSDGKWIVHDFIKEHNHEFFPAYAHYFPCHRRINTAQKNYIETLQNVRVRTTKIYATMAKQHGAIEFIEEGSLSHESYNFACHALGEALKQCATINQSLKIDKENIGKNKLGDTPLLDPRPSKTKGAPSQRMKSGIEKGRKRRKKEN 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02959 265 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 197 - -
Trre1g02959 265 Pfam FAR1 DNA-binding domain 54 139 IPR004330 -
Trre1g02959 265 MobiDBLite consensus disorder prediction 227 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02959 Trre-Chr1 25260546 25262752 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre1g02959 FAR1 2.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02959 - - mtr:112418473 267.314