Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02955 ATGACGAGAACGGAAAGTATAGACATTGTAACTGATCAGAACCTTGAAAAACATATTCACAAACACATGGGGTGCATGGCTGGTTTCTTTCAAATCTTCGACCGCAACCACATTCTCTCCGCCAAACGTATCTACTCCACCACCAAAAGACTCCCTCCGCCATCGCCGGAAACACCGCAGAAAGACGGTGGATCACCGGTGTTATTAGCACCGTCACCTGTTAAAGAGATCCAACAATGTGAAGCAAAACCGATCCTTCCTGTTCTAGAACTCAAAGAAGGTACGAGGTCTTCATGGAAATTCTCAAGAGAAGCTCCTAGACTGTCTCTTGATAGCAGAGCAGTTGTTGATGCGAAAGGAGCACTTCATCCAAGAGAGATCCGAACAAACACAACGGTAAATATCGATAACGGTGGCGGCGAGAAACAGCGTCGTTCCACCAGCAGTGTTATTGTTAGGCTAATGGGTCTTGACTCATTACCAACGGATTCCGCTGCGAAGCTTCAAAGATCCGCATCGGAGTCCAGAGTCTCCAGAGATCGGTTCTCTGAGTCGAAGATTAAGTCCAATAATTACACTCAACGTAGCAATGTGGGCTTGAGCCAGATGAATAATCATAATCATAATCATAATCACAATCATACTAATTCTAATGTTGTTAATGTTAATGCTAATAATGTTAATTTTGTTAATTCTTATGGTACCAATGATAATCGATTGTGGAATGGTAGAGGTTCAGAGGGAGGTAAAGGTTCACTTCCCCAGAAGCAGAGTAAGGGAACAATAATGGTACAAAAGAAGAGTTTCTATGATTCTACTGATTTCTTTCCTGAACCAAAGCAAAATGTTTCGATCTATGGAGAGATTGAAAAAAGGTTGAAGATGCGTGGGATTAATCAACCTTCTCAAGATCTTGACACACTCAAGCATATCTTAGAGGCTCTCCAGCTTAAAGGCCTTCTTCATTCCCAAAAACCAAACCAATCTCCCATTGTTCTAATGAAACCTCTTAGATCTTCTTCTCGGTTCGACCAGTTCAATGGTCGAACCGGATACGATTCTCCTCCTCCGCATTCTTCCGTTCGGTCCAGTCCTCGTGCTCGCCGGAACTTAAGTCCTAGACTTTCCGGTGAGAATGATCGGGCTCAAGTTAATTCAAGAAATTCGAGCCCGAGCAGGAGGAATGTCCCGAACGTGGAGATACGGAGGAGAGTTAGTAACGAGGGTGTTGATTCGAGAAGAGTGTCTCCAGCGAATTCGCCTAAGATAAGTTCAAGAAGAAATGCAACGGCTCCGACAATGACAGGTGGATCTCCTAGAATGAGAAAATTGATTGATCCTAAGGTGAAAATGATGAGTGTAGCAGAAGATGAATGGTCCACAGTTTCAGACAACAGCTTCACCACCTCTAATTCACATACAGATACAGAGAGATATAAATTGGATGAGTACAAGGAAGGGAGGAATCTGCTAGATAGATGTGATAAATTGCTGAACAGTATAGCGGAGATAACAGCAGCGAACGAGTTACAACAACCGAGTCCAGTATCCGTTCTTGACTCGTCCTTTTACAAAGACGAGTGGTGTTCACCTTCACCAATTACAAAACGATGCATTGATTACAATTTCAAAGATCAAGCGGCGGAATCAGAAGATGAAATGTGGAGTGCAGGCGAAGGAAAATCCGACGAAGCAGAGGATTGTGAATTCGTTTACGTATCGGAGATTCTTCGTGCTTCTAGTTACTTTCCTGAAGATTGTGACATTTTCGGTTTACTTGAGAAGCAACAATTTCTGAAGGGGAAAAATACATCAAAGGCTTCAACGTTACAGAGGCGGTTAATTTTCGACACATTACAGGAAATTATTAACCGGAACAATCGGTTACCGCCGTGGAAGGCGGTAGTTCAGGGAGATGAGACGCCGAAGATCTGGTCGGAGTTTCGAAGGATACGAGAGAGGGAAGAATCGGAATCGGAGTCGTCGGAGGATTTGTTTGGGGTGATATGTGGTGTGTTGAAGAAGGATATGGCGGAGGAGATGAGTGGTTGGGGTGAATGGACGGTGGAGATGGGAGATGTTGTTTTGGATATCGAACGGCTGGTATTCAAGGATTTAATTGGTGAAACTATACAACATCTTGCTTCATTTTTACCTCAATGTAACAAACTAGAAGTGCTTCGTAGAAAACTTGTATTTTAA 2202 0.4323 MTRTESIDIVTDQNLEKHIHKHMGCMAGFFQIFDRNHILSAKRIYSTTKRLPPPSPETPQKDGGSPVLLAPSPVKEIQQCEAKPILPVLELKEGTRSSWKFSREAPRLSLDSRAVVDAKGALHPREIRTNTTVNIDNGGGEKQRRSTSSVIVRLMGLDSLPTDSAAKLQRSASESRVSRDRFSESKIKSNNYTQRSNVGLSQMNNHNHNHNHNHTNSNVVNVNANNVNFVNSYGTNDNRLWNGRGSEGGKGSLPQKQSKGTIMVQKKSFYDSTDFFPEPKQNVSIYGEIEKRLKMRGINQPSQDLDTLKHILEALQLKGLLHSQKPNQSPIVLMKPLRSSSRFDQFNGRTGYDSPPPHSSVRSSPRARRNLSPRLSGENDRAQVNSRNSSPSRRNVPNVEIRRRVSNEGVDSRRVSPANSPKISSRRNATAPTMTGGSPRMRKLIDPKVKMMSVAEDEWSTVSDNSFTTSNSHTDTERYKLDEYKEGRNLLDRCDKLLNSIAEITAANELQQPSPVSVLDSSFYKDEWCSPSPITKRCIDYNFKDQAAESEDEMWSAGEGKSDEAEDCEFVYVSEILRASSYFPEDCDIFGLLEKQQFLKGKNTSKASTLQRRLIFDTLQEIINRNNRLPPWKAVVQGDETPKIWSEFRRIREREESESESSEDLFGVICGVLKKDMAEEMSGWGEWTVEMGDVVLDIERLVFKDLIGETIQHLASFLPQCNKLEVLRRKLVF 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02955 733 MobiDBLite consensus disorder prediction 412 435 - -
Trre1g02955 733 Pfam Domain of unknown function (DUF4378) 569 709 IPR025486 -
Trre1g02955 733 MobiDBLite consensus disorder prediction 342 396 - -
Trre1g02955 733 MobiDBLite consensus disorder prediction 164 194 - -
Trre1g02955 733 MobiDBLite consensus disorder prediction 342 441 - -
Trre1g02955 733 MobiDBLite consensus disorder prediction 241 260 - -
Trre1g02955 733 PANTHER LONGIFOLIA PROTEIN 13 58 IPR033334 GO:0051513
Trre1g02955 733 MobiDBLite consensus disorder prediction 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02955 Trre-Chr1 25187855 25190606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02955 99 733 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 35.423 5.38e-89 286