Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02931 ATGGAAGAGGTTGAACAAGCTAACAAAACAGCTGTTGAAAGCTGTCATAGAGTTCTGAGTATGTTGTGTCAACCAAGGGATCAAGTTCATCATATGAATTTAATGGTGGAAACTGGTGAAGCTGTGAATAGGTTCAAGAAAGTTGTGTCTTTGCTTCATAATGGTTTGGGTCATGCAAGAGTTAGGAAGAGTAAAAATCATCAACAAGACCCTTTTCCTCAAAATGTTTTCTTAGATAACCCAATTTGCAAAAAAACCATTAACCATCAAACTAAAAATCTTCACTTTACTCAAACTAGCCAACCTGAAAATTCAGTTCAGGAACTTGGTTTAACCTTAAGAAATCCACTTTCTCTTGGAAACCCTTCTTTGGAATTGAGCTCGAACGGTAAAAGTCCTCTTCACCTTATTCAACCGTTTGGATCATCTCACTATAACTTCATTCAGCAGCAACAACAGCAGCAGCAGCAAAGGTTGTTGCTGCATCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAAATGAAGCATCAAGCTGAAATGATGTTCCGAAGGAACACTAGTGGCATAAATCTTAATTTTGACAACACTACTAGCGGCACACCAACAATGTCGTCTAATAGGTCTTTCATTTCGTCGTTAAGCATAGACGGAAGTGTAGCTAACATGGACGGAAATTCATTCCATTTGATAGGAGCTCCAATCTCTTCGGATCAGAATTCACAGCAGCACAAGAGAAAATGTTCTGCTAGAGGCGATGAGGGAAGTCTGAAATGTGGTAGCAGTTCTAAATGCCATTGCTCAAAGAAAAGGAAGCATAGAGTGAAGAGATCGATTAAGGTGCCTGCAATTAGCAACAAGCTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTATGGGCAGAAGCCAATCAAGGGGTCTCCTCACCCTAGGGGATATTACAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTCGAGAGGTGCTTGGAAGAGCCTACTATGCTAATCGTTACCTATGAAGGTGATCATAACCACCCCAAGGTACCGACACAATCTGCAAATGCATGA 1095 0.4228 MEEVEQANKTAVESCHRVLSMLCQPRDQVHHMNLMVETGEAVNRFKKVVSLLHNGLGHARVRKSKNHQQDPFPQNVFLDNPICKKTINHQTKNLHFTQTSQPENSVQELGLTLRNPLSLGNPSLELSSNGKSPLHLIQPFGSSHYNFIQQQQQQQQQRLLLHQQQQQQQQQQQQQQQQMKHQAEMMFRRNTSGINLNFDNTTSGTPTMSSNRSFISSLSIDGSVANMDGNSFHLIGAPISSDQNSQQHKRKCSARGDEGSLKCGSSSKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGDHNHPKVPTQSANA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02931 364 Gene3D WRKY domain 284 358 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre1g02931 364 Coils Coil 162 182 - -
Trre1g02931 364 ProSiteProfiles WRKY domain profile. 291 357 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre1g02931 364 SMART WRKY_cls 296 356 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre1g02931 364 MobiDBLite consensus disorder prediction 238 258 - -
Trre1g02931 364 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 361 IPR044810 GO:0003700
Trre1g02931 364 SUPERFAMILY WRKY DNA-binding domain 294 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre1g02931 364 Pfam Plant zinc cluster domain 249 294 IPR018872 -
Trre1g02931 364 Pfam WRKY DNA -binding domain 298 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre1g02931 364 FunFam WRKY transcription factor 65 280 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02931 Trre-Chr1 24924271 24926064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02931 1 361 WRKY Transcription Factor Family AT2G30590 56.883 1.88e-121 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre1g02931 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02931 - - tpra:123924038 595.504