Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02913 ATGGATTTCCAAACATTGGTTTCACTCTTACTTTTCTCTGCAACTCTTGTTTCGTTCTTACTCATAGCTACATCAAAATTATCAAAATCCCCAAAAACACCCTCCACCGCCATCCCCAAATCTTACCCCATCTTCGGTTCTGCTTTTTCTTTAGCAGCCAACTTCCACCGTCGCATCCAATGGATCTCCGACATCCTCCAAACCATCCCTTCCTCCACCTTCGTCTTCCACCGTGCATTCGGCTCCCGCCAAGTCTTCACAGCTGACCCTGCTGTGGTCCAACACGTTCTCAAAACCAATTTCCCTTGCTACGGCAAAGGTCCCACGTTTATCCAATGCCTCGGTGATTTCCTTGGCGACGGAATCTTTAACACCGACGGTGAAAACTGGAAGTTCCAACGACAAATTTCCAGCCACGAATTCAACACTAAATCCCTCCGTAAGTTTGTTAAAACGGTGGTTGATGTTGAACTCTCAGATCGTCTTCTCCCTATTCTCTCCGAAGCTTCTAGAAACCAAACGGTACTCTCTGATTTCCAAGACATCCTCCAACGTTTCACATTTGATAATATCTGCATAATTGCGTTTGGATTTGATCCGGAGTATCTTCTCCCTTCTCTTCCTGAAACCGCGTTTGTAAAAGCCTTCGATGACAGCTCACTAATCAGCAGCAAGAGATTAAACGCGGCGATTCCTTTTCTATGGAAAGTGAAGAAAGTTCTAAATATTGGAACGGAGCGACGGCTGAAAGAAGCCGTCGCTGAAGTAAGAGGACTCGCGACAAGAATAGTTCGAGAAAAGAAAAAAGAGCTTATAGAAAAAACATCCTTGGAATCAATGGATATTTTATCGCGATTTTTAAATTTCGGTCATTCAGATGAAGCTTTTGTTGTTGATGTTGTAATAAGCTTTATTCTTGCCGGAAGAGATACAACTTCAGCAGCACTGACGTGGTTCTTTTGGTTACTCTCTAAGCATAGTCATACCGAGAATGAGATTCTCAAAGAGGTTATGGGAAAATCGGAAACAGTAAGTTATGATGAGGTGAAGGATATGGTTTACACTCATGCATCGTTATGTGAGAGTATGAGATTGTACCCTCCAGTTCCAGTGGATACTAAAGAAGCAGCATACGATGATGTTTTGCCAAATGGAATATTAGTGAAGAAAGGGTGGAGACTGACATATCATATATATGCTATGGGAAGGTCTGAGAAAATATGGGGAGCTGATTGGGCTGAGTTTCGACCCGAAAGGTGGTTGAGTCGGGATGAGGATGGGAAGTGGATCTTTGTTGGGATGGATCTTTATAGTTATCCGGTTTTTCAGGCTGGGCCCAGGGTGTGTATAGGGAAGGAAATGGCATTCCTGCAAATGAAGAGAGTGGTTGCTGCGATTATGAGACAATTCAGGGTGGTTCCAGCGATGGTTGAGGGGGTTGAGCCGGAGTACACTGCATATCTTACCTCTTTAATGAAAGGTGGTTTCCCTGTAAAGATTGAGAATCGTAGTCATACATACGAATAA 1527 0.4355 MDFQTLVSLLLFSATLVSFLLIATSKLSKSPKTPSTAIPKSYPIFGSAFSLAANFHRRIQWISDILQTIPSSTFVFHRAFGSRQVFTADPAVVQHVLKTNFPCYGKGPTFIQCLGDFLGDGIFNTDGENWKFQRQISSHEFNTKSLRKFVKTVVDVELSDRLLPILSEASRNQTVLSDFQDILQRFTFDNICIIAFGFDPEYLLPSLPETAFVKAFDDSSLISSKRLNAAIPFLWKVKKVLNIGTERRLKEAVAEVRGLATRIVREKKKELIEKTSLESMDILSRFLNFGHSDEAFVVDVVISFILAGRDTTSAALTWFFWLLSKHSHTENEILKEVMGKSETVSYDEVKDMVYTHASLCESMRLYPPVPVDTKEAAYDDVLPNGILVKKGWRLTYHIYAMGRSEKIWGADWAEFRPERWLSRDEDGKWIFVGMDLYSYPVFQAGPRVCIGKEMAFLQMKRVVAAIMRQFRVVPAMVEGVEPEYTAYLTSLMKGGFPVKIENRSHTYE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02913 508 CDD CYP86A 73 496 - -
Trre1g02913 508 SUPERFAMILY Cytochrome P450 39 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02913 508 Gene3D Cytochrome P450 23 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02913 508 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02913 508 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02913 508 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02913 508 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02913 508 Pfam Cytochrome P450 39 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02913 508 PANTHER CYTOCHROME P450 24 498 - -
Trre1g02913 508 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02913 508 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02913 508 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02913 508 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02913 508 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02913 Trre-Chr1 24672693 24674219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02913 1 506 Cytochrome P450 AT5G63450 46.004 3.40e-146 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02913 K20769 K20768 ag:AAG33645 816.609