Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02912 ATGGAACTCGAAACATTGATTTCATTGTTACTTTTCTCTTCAACAATCGTTTGGTTCTTGTTCTTAGCCACAAAAACACAATCCAAATTCCCCAAAATACCCTCCTCTACCACCGCCACCACCATTCCCAAATCTTACCCTGTCGTCGGTTCCATCTTTTCAATTGCAGCCAACTTCCACCGGCGCGTCCACTGGATCTCCGATATCCTCCACACCGTCCCTTCCTCCACCTTCATCCTCCACCGCGCCTTTGGCTCCCGCCAAGTCTTCACTGCAAACCCCGCCGTCGTCCAACATATTCTCAAAACCAACTTCTCTTGCTACCGTAAAGGTCAGACACTTCACCGTTCCGTCGGTGATTTCCTCGGAAACGGTATCTTCAACGCCGACGGTGAAACCTGGAAGTTCCAACGACAAATCTCCAGTCATGAATTCAACACTAAATCACTCCGCAAGTTCGTCGAAACCGTCGTGGATCTTGAACTCACCGATCGTCTCCTTCCTATTCTCTCAGAAGCTTCTAGAAACCAAACGATCCTCTCTGATTTTCAAGACATTCTTCAACGGTTTACTTTCGATAACATCTGCAGAATCGCGTTTGGATTCGATCCGGAGTATCTCCTCCCTTCTCTTCCTGAAACGGCGTTTGCAAAAGCCTTCGACGACGGCACGCTTATCAGCAGTGTTAGATTCAACGCCGCGGTTCCGTTGATATGGAAAATCAAGAAAATATTAAACATCGGAACGGAACGGCGGTTGAAAGAAGCTGTTGCAGAAGTAAGAGGACTAGCGACAAGAATTGTTAGAGAAAAGAAAAAAGAGCTTAAAGAAAAAGCAGCGTTAGAATCAGTGGATCTTTTATCGCGTTTTTTAAGTTCTGGTCATTCAGATGAAGCTTTTGTTGTTGATATTGTAATAAGCTTTATTCTTGCGGGAAGGGACACAACTTCAGCTGCACTCACGTGGTTCTTTTGGTTACTCTCTAAGCATAGTCACGTGGAGAATGAGATTGTCAAAGAGATTATGGGAAAATCGGAAACAGTTAGTTATGACGAGGTGAAGAATATGGTTTACACTCATGCGGCGTTATGCGAGACTATGAGATTGTATCCTCCAGTTCCAGTGGATACTAAAGAAGCAGCATACAATGATGTTTTGCCAGATGGGACTTTTGTGAAGAAAGGGTGGAGAATTGCCTATCATGTGTATGCTATGGGAAGGTCTGAGAAAATATGGGGGCCTGACTGGGCTGAGTTTCGACCCGAGAGGTGGTTGAGTCAGGATGAGGCTGGAAAGTGGATCTTTGTTGGGGTTGATCCTTATAGTTATCCTGTTTTTCAGGCTGGTCCAAGGGTGTGTCTAGGAAAAGAAATGGCGTTCTTGCAAATGAAGAGGTTGGTTGCCGGGATTATGAAGCAATTTAGGGTGATTCCGGCTATGGATGAAGATTTTGAGCCCGAGTACACCGCGCACCTTACCTCATTGATGAAAGGTGGTTTCCCCGTAAAGATTGAGGAGCGTAACCCAACAATTTATTAA 1539 0.4522 MELETLISLLLFSSTIVWFLFLATKTQSKFPKIPSSTTATTIPKSYPVVGSIFSIAANFHRRVHWISDILHTVPSSTFILHRAFGSRQVFTANPAVVQHILKTNFSCYRKGQTLHRSVGDFLGNGIFNADGETWKFQRQISSHEFNTKSLRKFVETVVDLELTDRLLPILSEASRNQTILSDFQDILQRFTFDNICRIAFGFDPEYLLPSLPETAFAKAFDDGTLISSVRFNAAVPLIWKIKKILNIGTERRLKEAVAEVRGLATRIVREKKKELKEKAALESVDLLSRFLSSGHSDEAFVVDIVISFILAGRDTTSAALTWFFWLLSKHSHVENEIVKEIMGKSETVSYDEVKNMVYTHAALCETMRLYPPVPVDTKEAAYNDVLPDGTFVKKGWRIAYHVYAMGRSEKIWGPDWAEFRPERWLSQDEAGKWIFVGVDPYSYPVFQAGPRVCLGKEMAFLQMKRLVAGIMKQFRVIPAMDEDFEPEYTAHLTSLMKGGFPVKIEERNPTIY 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02912 512 CDD CYP86A 77 500 - -
Trre1g02912 512 Gene3D Cytochrome P450 35 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 Pfam Cytochrome P450 43 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 SUPERFAMILY Cytochrome P450 43 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02912 512 PANTHER CYTOCHROME P450 27 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02912 Trre-Chr1 24636531 24638069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02912 1 507 Cytochrome P450 AT5G63450 45.243 6.69e-148 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02912 K20769 K20768 ag:AAG33645 818.92