Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02842 ATGGCCAACGAGCAAATCCAAGTGCTAAATAAACTTGATGTAGCAAAAACACAATGTTACCATTTCACAGCAATCATCATAGCTGGTATGGGTTTCTTCACCGATGCCTACGATTTATTCTGCGTATCGCTTATCACAAAGCTACTCGGTCGCATATACTACCATGTCGATGGAGCTGAAAACCCAGGGACATTACCACCAAATGTTGCAGGAGCAGTTAATGGAATTGCTTTGGTTGGAACACTTTTCGGACAACTTTTTTTCGGATGGCTCGGAGACAAATTAGGCCGTAAAAAAGTCTATGGCATGACATTAGCCCTAATGGTTTTATGTTCCTTATGTTCTGGTCTTTCTTTTGGAAGTGGACCAAAAGCTGTGTTGACAACTCTTTGTTTTTTTAGATTTTGGCTTGGTTTTGGTATTGGTGGTGATTATCCACTTTCTGCTACAATTATGTCAGAATACTCGAATAAAAAGACACGTGGCGCTTTTATAGCTGCAGTTTTTGCTATGCAGGGTTTTGGAATTTTAGCAGGTGGTGTATTTGCTATGTTAGTTTCAACTGCATTTAAATCGAATTTTGATGCACCAGCTTACATGGTTGATCCATTGGGTTCGACGGTTCCTGAAGCCGATTATGTTTGGAGGATAATCGTAATGTTTGGAGCAATTCCAGCTGCAATGACTTATTATTCAAGATCTAAGATGCCTGAAACCGCACGCTACACCGCACTTGTTGAGAAGAATATTGAAAAAGCTGCAGCAGATATGTCTAAGGTTTTGAACACAGATATTAAAGCTGAACCTACAATAGTTGTTGATCCTATTCAAGAGAAAAATAAATTCGGACTTTTTTCGAAAGAGTTTATGTCTCGTCATGGTTTGCATTTACTCGGAACCACATCCACATGGTTTTTGCTTGATGTTGCATTTTATAGTCAAAATCTTTTCCAAAAAGATATCTTCAGTGATGTTGGTTGGATTCCAGCTGCAAAGACGATGAATGCGCTCGAAGAGGTTTTTAGAATTGCGAGAGCACAAACACTTATTGCATTATGCAGTACAGTTCCTGGTTACTGGTTCACGGTTGCATTCATCGATAGAATCGGAAGATTTACTATTCAGTTAATGGGATTCTTCTTCATGACACTTTTTATGTTTGCTCTCGCTATTCCTTATGATTACTGGACACTTAAAGAAAACAGAACGGGGTTTATCATGCTTTATTCCTTAACTTTCTTCTTTGCGAATTTCGGGCCTAATGCTACAACATTTGTTGTGCCTGCCGAGATTTTCCCGGCTAGGTTTAGATCAACTTGTCATGGAATATCATCTGCGTCTGGGAAATTTGGAGCGATGGTTGGCGCGTTCGGGTTTTTATATTTGGCACAAAATCAGGACCCGAGTAAAGCTGATGCAGGGTACCCTGCAGGTATCGGTGTAAGAAACTCATTGCTTTTGTTAGGTGCGGTTAACATTTTGGGATTCTGTTTAACTTTCCTGGTTCCTGAGACAAACGGAAAATCTCTCGAGGAAATATCAGGTGAGGAAATTGACGAAATTGTTGATACTAGTCATCATAGTAACAACAGTGGTAGATTGATGGCATATATTTAG 1617 0.3964 MANEQIQVLNKLDVAKTQCYHFTAIIIAGMGFFTDAYDLFCVSLITKLLGRIYYHVDGAENPGTLPPNVAGAVNGIALVGTLFGQLFFGWLGDKLGRKKVYGMTLALMVLCSLCSGLSFGSGPKAVLTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGVFAMLVSTAFKSNFDAPAYMVDPLGSTVPEADYVWRIIVMFGAIPAAMTYYSRSKMPETARYTALVEKNIEKAAADMSKVLNTDIKAEPTIVVDPIQEKNKFGLFSKEFMSRHGLHLLGTTSTWFLLDVAFYSQNLFQKDIFSDVGWIPAAKTMNALEEVFRIARAQTLIALCSTVPGYWFTVAFIDRIGRFTIQLMGFFFMTLFMFALAIPYDYWTLKENRTGFIMLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKFGAMVGAFGFLYLAQNQDPSKADAGYPAGIGVRNSLLLLGAVNILGFCLTFLVPETNGKSLEEISGEEIDEIVDTSHHSNNSGRLMAYI 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02842 538 CDD MFS_PhT 25 505 - -
Trre1g02842 538 Gene3D MFS general substrate transporter like domains 20 530 IPR036259 -
Trre1g02842 538 FunFam Inorganic phosphate transporter 1-6 20 529 - -
Trre1g02842 538 Pfam Sugar (and other) transporter 26 514 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre1g02842 538 NCBIfam phosphate:H+ symporter 12 516 IPR004738 GO:0005315|GO:0006817|GO:0016020
Trre1g02842 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 507 IPR020846 GO:0022857
Trre1g02842 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 511 - -
Trre1g02842 538 SUPERFAMILY MFS general substrate transporter 13 514 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02842 Trre-Chr1 23563619 23565235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02842 1 515 Inorganic Solute Cotransporters AT2G38940 80.039 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02842 K08176 - gmx:100786638 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02842 1 23563619 23565235 Trre1g02842 1 23563619 23565235 ECH
Trre1g02842 1 23563619 23565235 Trre13g03959 13 47824986 47826593 PCT