Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02832 ATGGCCAATAATGTTTTTCTATTATTCTTTGTGTTTTTATTTTTCGCATCAATAATTTCTTTGGTGTGTGATGCCATTAAAAGTGATGATGAAAGCAGTAAATTTTACATTGTATACATGGGCTCTCTTCCTAAAGAAGCATCATATTCTCCAACCTCTCACCATATTAGCTTGTTGCAACAAGTTATCGATGATAGTGACATACAAAATTGCTTAGTTCGAAGTTACAAGAGGAGTTTCAATGGTTTTGCCGCTATACTCAATGATCAACAAAGGATAAAACTTTCTGGCATGAGAGGTGTGATATCAGTTTTTCCAAGTCAAGAGTACCACCTAAAAACCACAAGGTCGTGGGACTTCGTTGGTTTACCTCAATCAGCCAAACGGAGCAAAACTAATGAAAGTGATTTGGTGATCGGAGTCATAGATGGTGGAGTTTGGCCAGAATCTGAAAGTTTCAACGATATAGGTCTTGGTGCTATTCCAAAAAAGTGGAAAGGAGTTTGTGCAGGCGGACTTAACTTCAATTGTAACAAAAAGATTGTTGGAGCACGATTTTACGGTTTTAATGATGAGAGTGCAAGAGACTTAGAAGGTCATGGAACTCACACAGCGTCAACAGCTGGTGGAAGCGATGTGAAGGGTGCGAGCTTTAATGGTCTTGCAAAAGGAACTGCAAGAGGTGGAGTCCCAAACTCAAGGATTGCTACATACAAAGTTTGCAACGATCAAGGACAATGCGATGGTCATGCTCTGTTATCTGCATTTGATGATGCCATTGCAGATGGAGTTGATGTCATTACCATATCTCTGGGTAGACCAGAAATGATTGATTTTTTGAATGAACCTATTTCCATCGGTTCATTTCATGCCATGGAGAAGGGAATACTCACAGTGCAGGCTGCCGGAAACGATGGTCCTAGGCCAAGTACTGTTTCCAGTTTTGCACCTTGGTTATTCACTATTGCTGCAACTACTATGGATCGTCAATTCATTGATAAGCTCATTCTTGGAAATGGAAAGACGTTTATTGGTACGTCAATTAATATTTTCCCTTCAAATGGAACTAAATTTCCAATTGCCGTGCGTAATGCTCATGCTTGCTCTGCTGGAGGAATTGCATCCCCTGAAAAGTGTGATTGTATAGACAAAAATATGGTCAAGGGTAAACTTGTTTTATGCGGAGCACCGGGAGGTGAAAATTTCGCTTATGTCAATGGTGCAATTGGTTCGATCATTAATAGTACTAATACAGCTTCTATCACCGATAAGCCTTCACTTAACTTGGAAACAAAGGACTTTGTTCATGTTCAATCTTATACAAATTCCACTAAATATCCTGTAGCTGAAATTTTGAAGAGTGAGATCTTCCATGACGCCAATGCTCCTAGAATTGCCTCTTTCTCTTCTCGTGGCCCAAATACCTTAGTTCTAGAAATTATGAAACCAGATGTAAGTGCCCCAGGAGTCAATATTTTAGCTGCATTTCCACCTCAAAAATTATACTCAGATGTTATAGCGCAATACGCCCTATTATCTGGAACCTCTATGGCATGTCCTCACGTTGCTGGAGTTGTTGCATATGTGAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACCGCAAAACCGGTGAAAGGTACTTATGATGATTTGGCAGGTGAGTTTGCTTATGGTTCTGGGAATATCAATCCACAACAAGCCATTCACCCGGGACTTGTTTATGACATCTCTAAGGAAGATTATGTACAAATGCTTTGTAATTATGGGTATGATACTAACAAAATTAAACAAATTAGTGGAGATAACTCAAGTTGCAATGGACCTTCCAAAAGAGCCCTGGTGAAAGATATAAACTATCCGGCAATGGTGTTTCCTGCCAGGCCTTATCACAAGCGTTTCCATGTCAAGATTCATAGAACAGTCACAAATGTTGGTTTTCCAAACTCAACCTACAAGGCTACTCTCATCCATCATAATCCAAAAATCAAGATTAAGGTGGAACCAAAACTGCTCTCATTTAAATCATTAAATGAGAAACAATCATTTGTTGTCACCGTTGTTGGTGGGGCAAAATTAAATGAAACTGTGTATTCCTCATCACTTGTATGGTCCGATGGTACCCACAATGTCAAGAGTCCCATCATTGTGCAAATACTTCCTCAATATAATTGA 2196 0.3953 MANNVFLLFFVFLFFASIISLVCDAIKSDDESSKFYIVYMGSLPKEASYSPTSHHISLLQQVIDDSDIQNCLVRSYKRSFNGFAAILNDQQRIKLSGMRGVISVFPSQEYHLKTTRSWDFVGLPQSAKRSKTNESDLVIGVIDGGVWPESESFNDIGLGAIPKKWKGVCAGGLNFNCNKKIVGARFYGFNDESARDLEGHGTHTASTAGGSDVKGASFNGLAKGTARGGVPNSRIATYKVCNDQGQCDGHALLSAFDDAIADGVDVITISLGRPEMIDFLNEPISIGSFHAMEKGILTVQAAGNDGPRPSTVSSFAPWLFTIAATTMDRQFIDKLILGNGKTFIGTSINIFPSNGTKFPIAVRNAHACSAGGIASPEKCDCIDKNMVKGKLVLCGAPGGENFAYVNGAIGSIINSTNTASITDKPSLNLETKDFVHVQSYTNSTKYPVAEILKSEIFHDANAPRIASFSSRGPNTLVLEIMKPDVSAPGVNILAAFPPQKLYSDVIAQYALLSGTSMACPHVAGVVAYVKSFHPDWSPAAIKSAIMTTAKPVKGTYDDLAGEFAYGSGNINPQQAIHPGLVYDISKEDYVQMLCNYGYDTNKIKQISGDNSSCNGPSKRALVKDINYPAMVFPARPYHKRFHVKIHRTVTNVGFPNSTYKATLIHHNPKIKIKVEPKLLSFKSLNEKQSFVVTVVGGAKLNETVYSSSLVWSDGTHNVKSPIIVQILPQYN 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02832 731 Pfam Subtilase family 135 566 IPR000209 GO:0006508|GO:0008236
Trre1g02832 731 Pfam Fibronectin type-III domain 624 724 IPR041469 -
Trre1g02832 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 514 524 IPR023828 -
Trre1g02832 731 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Trre1g02832 731 PRINTS Subtilisin serine protease family (S8) signature 196 209 IPR015500 -
Trre1g02832 731 PRINTS Subtilisin serine protease family (S8) signature 513 529 IPR015500 -
Trre1g02832 731 Gene3D - 328 458 - -
Trre1g02832 731 FunFam Subtilisin-like protease SBT5.3 25 113 - -
Trre1g02832 731 SUPERFAMILY Subtilisin-like 5 656 IPR036852 GO:0004252|GO:0006508
Trre1g02832 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 113 IPR037045 -
Trre1g02832 731 CDD Peptidases_S8_3 110 549 IPR034197 -
Trre1g02832 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 724 IPR045051 -
Trre1g02832 731 CDD PA_subtilisin_like 335 451 - -
Trre1g02832 731 ProSiteProfiles Serine proteases, subtilase domain profile. 117 576 - -
Trre1g02832 731 Gene3D Peptidase S8/S53 domain 136 589 IPR036852 GO:0004252|GO:0006508
Trre1g02832 731 Gene3D - 593 727 - -
Trre1g02832 731 Pfam Peptidase inhibitor I9 36 112 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02832 Trre-Chr1 23512635 23519491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02832 30 727 Subtilisin-like Serine Gene Family AT5G59090 52.468 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02832 - - psat:127076787 889.026