Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02783 ATGCAGCTCAAAACTCAGTTTTTCTTCTTCTGTTGCATTTGCTCTTTCCCTTATAGCTTTTATGCTGCAGAAAATAATGAAGTATCTGCTTTACTTGCTATAAAAGCCGGTCTCATTGATCCGTTGAATAGCCTACATGATTGGAAGGATGGTGATCGAGATGCCGCTCGATCTCATTGTAACTGGACTGGTGTCAAGTGCAATGCAGCAGGAGCTGTTGAGAAGCTTGATATCTCACACATGAATCTGAGTGGAAGTGTCTCCAATGAGATACAAAGTTTAAAAAGTTTAACTTTTTTAAACTTGTGCTGCAATGGATTTGAGTCATCACTTTCAAAGAACATAACCAATCTTGCCTCGCTAAAGAGCCTCGACGTAAGCCAGAATTTCTTCACCGGCGTCTTTCCATTAGGCCTTGGAAAGGTGGCATCGGAACTTGTTACCTTGAATGCATCAAGCAACAATTTCTCAGGTTTTCTTCCTGAGGACCTTGGAAATATCTCTTCCTTAGAGATACTTGATCTTAGAGGCAGCTTCTTTGAAGGTTCTATTCCAAAATCCATTAGTAACTTGAGTAAGTTGAAATTCCTTGGTCTATCTGGGAATAATCTCACCGGGAAGATCCCGGTTGAGATTGGAAAACTTTCATCACTGGAGTCTATGATCATCGGTTATAACGAATTTGAAGGTGGAATTCCAAAAGAGTTTGGGAATTTAACCAAGCTGAAGTATCTTGATTTAGCAGAAGGCAATTTTGGTGGTGAAATTCCTGATGAGTTGGGAAAACTCAAGTTATTGAACACAGTTTTCTTATACAAGAACAGTTTTGAAGGGAAAATTCCTCCAACTATTGGCAACATGACTTCATTGGTGTTGCTTGATCTGTCAGACAACATGTTATCGGGAAATATTCCAGCCGAAATAAGTCAGCTGAAGAATTTGCAGCTTCTGAACTTCATGAGGAACAAGCTATCTGGTCCTGTGCCTTCTGGCCTTGGAGATTTGAGTCTACTGGAGGTTCTTGAACTATGGAACAATTCCTTGTCAGGGCCATTGCCTAGTGACCTCGGCAAGAATTCACCGTTGCAGTGGTTGGATGTATCGTCCAATTCACTCTCTGGCGAGATTCCAGAAACAATTTGCACTAAGGGCAATCTCACCAAGCTTATACTTTTCAACAATGCCTTCAAGGGTCCAATTCCAACAAGCCTATCAAAATGTCCTTCACTCGTTCGCGTTCGGATTCAAAACAATCTTCTTTCTGGTACAATTCCTGTTGGTTTTGGTAAGCTTGAGAAGCTACAGAGGCTAGAATTGGCCAACAATAGTCTCACTGGTGGAATTCCGGACGACATTGCTTCTTCCACATCTCTTTCATTCATTGATTTTTCCAGAAACAAACTCCACTCTTCTATTCCTTCCACTGTTATTTCAATTCCAAATCTGCAAACATTCATAATCTCCGAAAACAACCTGGAAGGTGATATTCCAGATCAATTCCAGGACTGTCCATCACTTGGAGTCCTGGATCTCTCGTCTAACTTTTTCTCTGGAATCATTCCAGAAAGCATTGCTTCGTGTCAGAAATTGGTAAAATTGAGCCTACAGAACAACCAATTGACTGGTAGCATCCCAAAAGCAATAACAAGCATGCCTACATTATCCATTCTTGATCTTTCTAACAACTCTTTAACTGGTCAGATACCTGATAACTTTGGTATGTCTCCGGCTTTGGAAACATTCAATGTCTCATACAACAAGCTAGAAGGTCCTGTTCCGGAAAATGGCATGCTAAGAGCATTAAATCCAAACGATCTTGTGGGAAACGTGGGCCTATGTGGTGGTTTCTTTCCCCCATGTGGAAAAACCTCAGCATATTCATTAAGGCGCGGAAGCTCACATGGAAAGCGCGTAATTATAGGATGGATAATTGGACTATCATCAATCTTAGCCATCGGAGTTGCTGTTTTGGTATCTAGATCTATATACATGAAGTGGTACACGGAAGGATTATGCTTCCAAGGAAGATTTTATGGAGGTAGTAAGGGATGGCCTTGGAGATTGATGGCATTTCAGAGACTCGATTTTACCAGTACTGATATCTTATCCTGCATCAAGGAAACAAATGTGATAGGCATGGGAGCGACCGGGGTTGTTTATAAGGCCGAGGTACCACAATCAAGTACAGTCGTGGCAGTCAAAAAATTGTGGAAATCAGGATCTGATGTTGAAGTAGGAAGTAGTGATGATCTTGTTGGAGAGGTGAATCTTTTAGGGAGGCTAAGGCATAGGAACATTGTTAAACTACTAGGGTTTCTTTATAATGACACGGATGTGATGATAGTGTATGAATTTATGCTCAATGGAAACCTTGGAGATGCCTTGCATGGTAAACAATCAGAGAGATTGCTTGTAGACTGGGTTTCACGGTATAACATAGCTCTAGGAGTCGCACAAGGACTCTCTTATCTTCATCATGACTGTCATCCACCTGTTATCCATCGAGACATCAAGTCGAATAATATACTGCTTGATGCAAATCTTGACGCAAGGATAGCAGATTTCGGATTAGCCAAGATGATGATCCGTAAGGATGAAACGGTCTCCATGATTGCTGGATCCTATGGATACATTGCCCCAGAATATGGATACTCCTTGAAGGTAGATGAAAAGATTGACATTTACAGCTTTGGAATAGTTCTGTTGGAGCTTATAACAGGAAAGCGGCCGATAGATCCGGAGTTTGGAGAATCTATAGACATTGTAGGGTGGATAAGAAGGAAGATAGACAAAAATTCTCCAGAAGAGGCATTAGACCCAAGTGTAGGAAACTGTAAACATGTTCAAGAGGAGATGCTTTTAGTTCTGAGAATAGCACTTCTTTGCACTGCCAAGCTACCTAAAGACAGACCCTCCATGAGGGATGTTATAATGATGCTAGGAGAGGCAAAGCCTCGGAGAAAAAGTGTTAGGAACAAAGAGATGACAGTAATTAGCAGTTAA 3003 0.4123 MQLKTQFFFFCCICSFPYSFYAAENNEVSALLAIKAGLIDPLNSLHDWKDGDRDAARSHCNWTGVKCNAAGAVEKLDISHMNLSGSVSNEIQSLKSLTFLNLCCNGFESSLSKNITNLASLKSLDVSQNFFTGVFPLGLGKVASELVTLNASSNNFSGFLPEDLGNISSLEILDLRGSFFEGSIPKSISNLSKLKFLGLSGNNLTGKIPVEIGKLSSLESMIIGYNEFEGGIPKEFGNLTKLKYLDLAEGNFGGEIPDELGKLKLLNTVFLYKNSFEGKIPPTIGNMTSLVLLDLSDNMLSGNIPAEISQLKNLQLLNFMRNKLSGPVPSGLGDLSLLEVLELWNNSLSGPLPSDLGKNSPLQWLDVSSNSLSGEIPETICTKGNLTKLILFNNAFKGPIPTSLSKCPSLVRVRIQNNLLSGTIPVGFGKLEKLQRLELANNSLTGGIPDDIASSTSLSFIDFSRNKLHSSIPSTVISIPNLQTFIISENNLEGDIPDQFQDCPSLGVLDLSSNFFSGIIPESIASCQKLVKLSLQNNQLTGSIPKAITSMPTLSILDLSNNSLTGQIPDNFGMSPALETFNVSYNKLEGPVPENGMLRALNPNDLVGNVGLCGGFFPPCGKTSAYSLRRGSSHGKRVIIGWIIGLSSILAIGVAVLVSRSIYMKWYTEGLCFQGRFYGGSKGWPWRLMAFQRLDFTSTDILSCIKETNVIGMGATGVVYKAEVPQSSTVVAVKKLWKSGSDVEVGSSDDLVGEVNLLGRLRHRNIVKLLGFLYNDTDVMIVYEFMLNGNLGDALHGKQSERLLVDWVSRYNIALGVAQGLSYLHHDCHPPVIHRDIKSNNILLDANLDARIADFGLAKMMIRKDETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSFGIVLLELITGKRPIDPEFGESIDIVGWIRRKIDKNSPEEALDPSVGNCKHVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKSVRNKEMTVISS 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02783 1000 Pfam Protein kinase domain 707 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g02783 1000 FunFam MDIS1-interacting receptor like kinase 1 705 789 - -
Trre1g02783 1000 Gene3D Phosphorylase Kinase; domain 1 705 789 - -
Trre1g02783 1000 ProSiteProfiles Protein kinase domain profile. 705 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g02783 1000 Gene3D Ribonuclease Inhibitor 26 144 IPR032675 -
Trre1g02783 1000 Gene3D Ribonuclease Inhibitor 331 627 IPR032675 -
Trre1g02783 1000 Pfam Leucine rich repeat N-terminal domain 25 68 IPR013210 -
Trre1g02783 1000 Pfam Leucine rich repeat 480 540 IPR001611 GO:0005515
Trre1g02783 1000 Pfam Leucine rich repeat 408 468 IPR001611 GO:0005515
Trre1g02783 1000 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 179 279 - -
Trre1g02783 1000 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 24 178 - -
Trre1g02783 1000 SUPERFAMILY RNI-like 255 595 - -
Trre1g02783 1000 FunFam MDIS1-interacting receptor like kinase 1 790 998 - -
Trre1g02783 1000 FunFam Leucine-rich repeat receptor protein kinase EMS1 280 363 - -
Trre1g02783 1000 SUPERFAMILY Protein kinase-like (PK-like) 697 980 IPR011009 -
Trre1g02783 1000 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Trre1g02783 1000 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 173 975 - -
Trre1g02783 1000 SUPERFAMILY L domain-like 57 306 - -
Trre1g02783 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Trre1g02783 1000 Gene3D Ribonuclease Inhibitor 232 330 IPR032675 -
Trre1g02783 1000 Gene3D Ribonuclease Inhibitor 145 231 IPR032675 -
Trre1g02783 1000 SMART serkin_6 705 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g02783 1000 SMART LRR_typ_2 551 574 IPR003591 -
Trre1g02783 1000 SMART LRR_typ_2 118 141 IPR003591 -
Trre1g02783 1000 SMART LRR_typ_2 287 311 IPR003591 -
Trre1g02783 1000 SMART LRR_typ_2 191 215 IPR003591 -
Trre1g02783 1000 SMART LRR_typ_2 335 359 IPR003591 -
Trre1g02783 1000 SMART LRR_typ_2 431 455 IPR003591 -
Trre1g02783 1000 Gene3D Transferase(Phosphotransferase) domain 1 790 999 - -
Trre1g02783 1000 Pfam Leucine Rich Repeat 169 191 IPR001611 GO:0005515
Trre1g02783 1000 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 364 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02783 Trre-Chr1 23016185 23019373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02783 1 990 Receptor kinase-like Gene Family AT1G08590 61.357 0.0 1176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre1g02783 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02783 - - gmx:100788430 1646.71