Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02768 ATGTCAACTTCACTTATCATCTTTTTCGCTTTGGTTCATTTGCTACTTTACTCTTCCTCAGCAGGGTTGATTTCTATGAGTTTGTCATTTTCTTCGTCCGAACCAGCCATAGTGTGGTTTTCTAAACCTTCTTCCGGTTCATCTTCTGAACCTGTGCCATCTCCAATGTTTGAAGGCCGTAGTGTCAGTCAAGGGCAGAAAAAACATCCTCATCCTCACAGTCCTTCCCATCGCGCGAAACCTTATGCTGTTGCTCCCTCCCCTTCTGAAAGCCAAGCATGTGGCCTAAGCTGTAGGGATCCACTCACAGAAACTCCCTTTGGTTCACCTTGTGGTTGTGTATTTCCGATGAAAGTCGGACTTTTACTGGATACAGCTTCTTTGGTTGTTTTTCCGGTAGTTAACGAGTTAGAGATTGAACTTGCATCTGGAACATATTTGAAGCATAGCCAGGTGAGGATAATGGGTGTTAGTGCTGACATTTCAAATCAAGGAAGAACTGTAGTTGATATTGACCTGGTTCCGCTTAGTGAGAAATTTGACAATAAGACTGTGGTTCTGATATACCGAAGATTTTCGCACAAGAAAATTCATCTAAATAGGAGTCTTTTTGGTGATTACACACTCTTGTACATTACTTATCCAGTATTAGGGATGCCACCATTGCTGCCACATGGAACATCAACTGGGAGTGGTCCCCTTCCCTGTGGAAATACTTCAGGTCTCCCATTCACTGCCAACTTTACCGGTGGCAGGAAGAACGAGGAAATGAGTCTTAGAACCATAATCATCATTGCTGTATCTTCCGTTATAGTCTTGTTCGGCATGGTTGGAATCTTTTACATCATTTTTAAATGGAGGAAAACCAGGAGACCATCAAGTGATCTTGACCTGCAATTCACATTGTCTCCAAACATGAGATCTGTCATGGGGCCTATGTTGTGTAGCAGAATGACAAGCTCAACATCAGTGTCCCATATGTCCACCATGGATACTTCTGCTCTTTCTGTGAAAACATTTTCCCTTTCTGAAATTGAGAAAGCAACAGATAGGTTCAGTTCACAAAGAGTTTTGGGAGAAGGAGGATTTGGGCGGGTTTATCATGGGAGATTAAATGATGGAACTGATGTTGCAGTTAAGCTGCTAACAAGGGATATTCAGCAAAGTGGAGACCGTGAATTTACTGTGGAAGTTGAGATGCTATGCCGTTTGCATCATCGTAATCTTGTGAAACTCATCGGTATATGCACAGAAGGGCATATACGATGCTTGGTGTATGAGCTTGTTCGCAATGGCAGTGTTGAATCTCATTTGCATGGTGTTGACAAGAGAAATAACCCTCTAGATTGGGAAGCACGGAAAAAAATTGCCCTTGGAGCTGCGAGAGGATTGGCCTATCTTCACGAGGATTCTAATCCTCATGTGATCCACCGAGACTTCAAAGCTAGCAACGTGTTGTTAGAAGATGACTTTACCCCTAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCAACTGAAGGAAGCCATCCTGTTCCTACAAGGGTCATGGGTACTTTTGGGTATGTTGCCCCAGAATATGCAATGACGGGCCATTTGCTCGTTAAAAGTGATGTTTATAGTTATGGTGTTGTGCTTCTTGAACTTCTAACCGGAAGAAAGCCAGTGGACATGTCTCAACCTGTTGGAGAGGAGAATCTTGTAGTATGGGCACGGCCACTGTTGAAAAGTAGAGAGGGTTTAGAGCGGCTGGTGGATCCGACATTGGCTGGAACTTATGACTTCGATGAAATGGCAAAGGTTGCTGCTATTGCTTCAACGTGTGTAAACCTGGAGGTCACTCGTAGACCCTTCATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATATTCAATGACAATGACGATACCGATTACTACAGCCTGAAGGAATCTTCTGGTCGAGAGTCTGATTTTAGAGGCGACCTTTCTGATAGCAGTGTGTGGTATGATGAGTCTGAAGATATAACATGTCGCCTTGCTTTTAGGCCAACATTAGCATCTACCATCATCACAATGGATTACAGTTCTGGTCCACTTGATGTACTGGAAAACAGACAGTTTGCAGGTTCAACCTATATGGGAGATGATATGTCTTTACCGATTAGACTTGGGAATAGTTCAGGTCCCTTGAGAACAGCCCGGCGAAGCAACCTATCCTTTTATAGGTTTACTGGTAGTCAGAGTGATCATGGAGTATTTCCTTCCAAGCGCGTTTCGAACTAG 2259 0.4347 MSTSLIIFFALVHLLLYSSSAGLISMSLSFSSSEPAIVWFSKPSSGSSSEPVPSPMFEGRSVSQGQKKHPHPHSPSHRAKPYAVAPSPSESQACGLSCRDPLTETPFGSPCGCVFPMKVGLLLDTASLVVFPVVNELEIELASGTYLKHSQVRIMGVSADISNQGRTVVDIDLVPLSEKFDNKTVVLIYRRFSHKKIHLNRSLFGDYTLLYITYPVLGMPPLLPHGTSTGSGPLPCGNTSGLPFTANFTGGRKNEEMSLRTIIIIAVSSVIVLFGMVGIFYIIFKWRKTRRPSSDLDLQFTLSPNMRSVMGPMLCSRMTSSTSVSHMSTMDTSALSVKTFSLSEIEKATDRFSSQRVLGEGGFGRVYHGRLNDGTDVAVKLLTRDIQQSGDREFTVEVEMLCRLHHRNLVKLIGICTEGHIRCLVYELVRNGSVESHLHGVDKRNNPLDWEARKKIALGAARGLAYLHEDSNPHVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHPVPTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPVGEENLVVWARPLLKSREGLERLVDPTLAGTYDFDEMAKVAAIASTCVNLEVTRRPFMGEVVQALKLIFNDNDDTDYYSLKESSGRESDFRGDLSDSSVWYDESEDITCRLAFRPTLASTIITMDYSSGPLDVLENRQFAGSTYMGDDMSLPIRLGNSSGPLRTARRSNLSFYRFTGSQSDHGVFPSKRVSN 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02768 752 PANTHER OS01G0750732 PROTEIN 87 651 - -
Trre1g02768 752 Gene3D Transferase(Phosphotransferase) domain 1 429 646 - -
Trre1g02768 752 FunFam receptor-like serine/threonine-protein kinase ALE2 325 428 - -
Trre1g02768 752 Gene3D Phosphorylase Kinase; domain 1 322 428 - -
Trre1g02768 752 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Trre1g02768 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Trre1g02768 752 FunFam Receptor-like serine/threonine-protein kinase ALE2 429 643 - -
Trre1g02768 752 SUPERFAMILY Protein kinase-like (PK-like) 336 624 IPR011009 -
Trre1g02768 752 MobiDBLite consensus disorder prediction 45 88 - -
Trre1g02768 752 CDD STKc_IRAK 358 628 - -
Trre1g02768 752 ProSiteProfiles Protein kinase domain profile. 352 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g02768 752 Pfam Protein tyrosine and serine/threonine kinase 354 624 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02768 Trre-Chr1 22886219 22891777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02768 98 744 Receptor kinase-like Gene Family AT5G56890 49.699 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre1g02768 PK_Tyr_Ser-Thr 8.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02768 - - lja:Lj0g3v0221179.1 939.873