Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02755 ATGGATTTGAAGAAAGGAAACTCAAGTATGTATCTGTTGGCACTAGTATTCATTTTGGCTTTAACCTTTCCAACTCTTTTGAGTGCTTCAAGTTCTTATGCAACAAAAGACCATTTATTCCCTGAATTCATAAAGTGGCATGTATTTGTTGTTAATTCATTGAGCTACAGCCAAAGCTTGTTCACACATTGCAAATCATCAGAAGATGATATTGGTATCCATAATCTATCTCCAGGTTCCAATATCACTTGGAGTTTTAGGACAGATTTCTTCCACGCAACAAAGTTTTGGTGCTATGTGACTAAAGACAGCGCTTCTCTTAATTTCGATGCTTTCTGGTATGATGCTCGTCTTTTTGATAAGTGTGATTGGAAAAATTGCATTTGGGTTGCTAAAGATGATGGAGTTTACCTGAAAAATTTGAGTGGAAGAGTTGATGAGTTGGTTTATAAGTGGGATATTGGAAACTAA 471 0.3588 MDLKKGNSSMYLLALVFILALTFPTLLSASSSYATKDHLFPEFIKWHVFVVNSLSYSQSLFTHCKSSEDDIGIHNLSPGSNITWSFRTDFFHATKFWCYVTKDSASLNFDAFWYDARLFDKCDWKNCIWVAKDDGVYLKNLSGRVDELVYKWDIGN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02755 156 PANTHER - 44 140 IPR010264 -
Trre1g02755 156 Pfam Plant self-incompatibility protein S1 47 152 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02755 Trre-Chr1 22751353 22751823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02755 27 153 Carbohydrate Esterase AT3G16970 25.373 2.22e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02755 - - mtr:25484172 281.182