Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02749 ATGTATAAAGAAATGAAGTCTAAGCACAATCCATCAAATGTAGTAGCCAAATTAATGGGGCTTGAAACCCTTTCAAAGGGAGAGCCTAATTTATCTATGATTAGAAGCCAAACTAAAGATTATTCTCAAGATATGTATGCTCATTTAGGATGGCCATTGAAACATTGGAAGGTGGAAGATAAGTTTATGACGGATAATAAGGAATTGCTTCTTGAAGTTCATCATCCAAGCACGGAACAGATTGGTAACAAAGATGGATATGAAACATGGCTGCAATCTCAGAGAGGAAGGTGGAGAGAAGATTTTGATGAGGGGAAGATGGCTCTTGTCCGTCAGAAATTCATCGAAGCAAAGTATCTGTCGACTGATGAGACGTTGCGTCAATCCAAGCAATTTGAGGATGCATTGGATATTTTAAGCTCTAACAATGATCTCTTAGTCAGGTTTTTGGATTCACAAAAGCTTTATCAACTTCCGTCTACTCCACCGGACGATTCAAACTGCATTACCCTTATCAAACCCTTGAAGATGTTTGGAAATGACAAATCTTCCGGAAAGGGTAGGAAGAATGATAGATTGATTAAGAAACCAGCAGATTCTGATCAAACAACTGTATGGGAGAACATGAATCGTGGATACTCTCCGGAATCTACTCGAATAGTAGTATTGAAACCTAGTCCTGGAAGGGCAAATGAACTTAAGGCTTTAGTTTCGCCAACAAATCCATCACCTCAAAGTTTCTATCAGGGAAATGCAAATGATAATGTACTTGAATCCATAAAAGTGGCTAAAGAGATTAGAATGCAAATGCAAATGCAAGAAAGCCTAAGGAGCTATCAAAAGGATAAAAGTTTATTACATTCTTCAGCATTTTCCAATGGCTATTCTAGTGATGATAGCTCATATAACAAATCATATCATGATTTGGAAGCTATGTCACCAATGCCAAGGCATTCATGGGATTGTATCAATGTATGTGGAAGTCCTTATTCTACGCAATCTATGGGTCGTGCAACATGTTCTCCTGAGTCATCGGTGTGCATAGAGGCAAAGAAACGGCTTTCTGAAAGATGGAATACAGTTACAGCTAAAGAAAAAGATCATCAAGAACAAAGGCGTGTAGCGAGAAACTCTACCTTAGGTGAAATGCTTTCTCTTTCCCTTGTAAAGAAATCTGTTACATCTGTGGTTGAGAGTGCTGATAAACACCATGAAGAACCAAGTAAATCCATTTCTTGCAGTCAATCTGCCAATGAAGAAATGAGCACCGATGATTCATCTCAAAATGTTTCTTTGGCAAATTCTGTTCCTGCATCGTCTACTGTCAATGAACCCGGCCTCGACGTTGATGCTAGCATAGAACATGACTCCAAGGTGGTAGCAAATACAAAGAGTAAGAAATCATCGTTTAAAGGGAAAGTGGCAAGTTTCTTCTTTTCAATGAGTAAAAAATCAACCAAGAAAAAATCTAGTTCATCTCAATCTATAGATGAATCTGAAACCACTGTCACTGAAACATCGGTTCCATCAGTAAATTCACCTGGACATAATGTGTCTCAAAGCTCAAATGTTGGTGGATTTGAAGAGTCTCTTGCAGCTCTGTGTGAATTATCATGCAAAACTTCAACAGATTCATATTCTTGTGGACAACAAGACATGATTACACTAGAGCATGGATTGATTGAGTCAAAGCCTGTGGTGCTAGAGATTCCAAATGAAAAACAGGATCGACCAAGTCCAATCTCAGTATTAGAATCTCCATTTGAAGATTATAATACAGCTCATGAGTCCTTGGAATGCATGAAGGGTGATCACATGGGATCATTGGTGTCACTAAAGTCCAATTTAATTGACAAATCACCACCAATAGAATCAGTAGCTAGGACACTATCATGGGATGAAGATTCTTGTGCAGAGTTAACAAGGGCTTCTTCCTTAGACACCAAGTTAGAGGAACATGATTGGCTTTTCTTAGTCCAAAAACTACTATCAGCTTCTGGACTAGATGATGATGATCAAGAACAACAGCATGACTCATTTCACACAAGATTCCATTCCCTTGAAAGCCCATTAGACCCATCATTGAGGGACACATATGCCAACATAAATGAAAACAAGGACTGTACTCAGCCTCTTAATGAGGCCAAGAGAAGGAAAATGAGATCAAATCAGAAACTTGTATTTGATTGTGTTAATGCTGCACTATTGGAAGTTGTTGGTTATGGCTCAGAAAATTACTTCAAGATGTACTGTGGGACCCGCAAGAGGGCCTTAGTTCAAGAAGGTTCATGTTTGATGGACCACATTGTGACTCAAATGAAGGAATTAATAGCAAATGGGATGAGGTTTGTTTGGGGTGGGGACAGTCACAGCCTGGTTGTAGAAAATGTTGTTAGAAAAGAGGTTGTGCAGATTGGGTTGGCTGAGGTTTTGAGAATGGAGATTGATTCTTTGGGGAGGGAAATAGAAGGAAAGATAATAGAAGAACTAGTAGAAAATGCTGTGCTTGATTTTACAGGAAGATGA 2526 0.3892 MYKEMKSKHNPSNVVAKLMGLETLSKGEPNLSMIRSQTKDYSQDMYAHLGWPLKHWKVEDKFMTDNKELLLEVHHPSTEQIGNKDGYETWLQSQRGRWREDFDEGKMALVRQKFIEAKYLSTDETLRQSKQFEDALDILSSNNDLLVRFLDSQKLYQLPSTPPDDSNCITLIKPLKMFGNDKSSGKGRKNDRLIKKPADSDQTTVWENMNRGYSPESTRIVVLKPSPGRANELKALVSPTNPSPQSFYQGNANDNVLESIKVAKEIRMQMQMQESLRSYQKDKSLLHSSAFSNGYSSDDSSYNKSYHDLEAMSPMPRHSWDCINVCGSPYSTQSMGRATCSPESSVCIEAKKRLSERWNTVTAKEKDHQEQRRVARNSTLGEMLSLSLVKKSVTSVVESADKHHEEPSKSISCSQSANEEMSTDDSSQNVSLANSVPASSTVNEPGLDVDASIEHDSKVVANTKSKKSSFKGKVASFFFSMSKKSTKKKSSSSQSIDESETTVTETSVPSVNSPGHNVSQSSNVGGFEESLAALCELSCKTSTDSYSCGQQDMITLEHGLIESKPVVLEIPNEKQDRPSPISVLESPFEDYNTAHESLECMKGDHMGSLVSLKSNLIDKSPPIESVARTLSWDEDSCAELTRASSLDTKLEEHDWLFLVQKLLSASGLDDDDQEQQHDSFHTRFHSLESPLDPSLRDTYANINENKDCTQPLNEAKRRKMRSNQKLVFDCVNAALLEVVGYGSENYFKMYCGTRKRALVQEGSCLMDHIVTQMKELIANGMRFVWGGDSHSLVVENVVRKEVVQIGLAEVLRMEIDSLGREIEGKIIEELVENAVLDFTGR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02749 841 MobiDBLite consensus disorder prediction 488 523 - -
Trre1g02749 841 Pfam Protein of unknown function (DUF3741) 111 152 IPR022212 -
Trre1g02749 841 MobiDBLite consensus disorder prediction 397 450 - -
Trre1g02749 841 MobiDBLite consensus disorder prediction 495 523 - -
Trre1g02749 841 Pfam Domain of unknown function (DUF4378) 659 832 IPR025486 -
Trre1g02749 841 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 840 - -
Trre1g02749 841 MobiDBLite consensus disorder prediction 410 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02749 Trre-Chr1 22733134 22736744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02749 1 839 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 36.175 1.58e-123 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02749 - - psat:127093203 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02749 1 22733134 22736744 Trre1g02749 1 22733134 22736744 ECH
Trre13g04102 13 48885119 48889783 Trre1g02749 1 22733134 22736744 PCT