Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02708 ATGGCAGACCAACAACATCCCCATCATGAACATTCAAATGTGTTGCCGAACCAACAACCATCTTCTTCTACACAATCACCTCCATCTACTTCTACACAACCACCTCCATCTACTTCTACAACTCATCAAGTCAACGAAATTATAGAGGAGGAAGTTGTGAGGTCAAACCAACAACCCACCCATCAAACTTGGATGCACAGGGCGAAGCCGTTCTTCATTGTCATACTATTGCAATTCTTATTTGCATTGATGAATTTATTTTCAAAGATGGCGATGAACAATGGGTTGAGCAGCTATATAATTGTTCCATATCGCAATGCAAGTGCATTTGTGGTCATAGCGCCATTTGCGATTTACTATGAAAGGAATCGATGGCCCAAAATGACATTTACAGTATGTGTAAAAATGTGGGTGCTCAGTATATTAGGGCCTATTATGGACCAAGATTTTTACTTCTTGGGGATGCAGTTTTCTACCGCAACTCTTGCGTTTGCCTTGGGCAATACTCTTCCGGCCATGACCTTTGTTTTGGCTTGTGCTACTGGATAA 549 0.4153 MADQQHPHHEHSNVLPNQQPSSSTQSPPSTSTQPPPSTSTTHQVNEIIEEEVVRSNQQPTHQTWMHRAKPFFIVILLQFLFALMNLFSKMAMNNGLSSYIIVPYRNASAFVVIAPFAIYYERNRWPKMTFTVCVKMWVLSILGPIMDQDFYFLGMQFSTATLAFALGNTLPAMTFVLACATG 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02708 182 PANTHER WAT1-RELATED PROTEIN 69 179 IPR030184 GO:0016020|GO:0022857
Trre1g02708 182 MobiDBLite consensus disorder prediction 1 42 - -
Trre1g02708 182 MobiDBLite consensus disorder prediction 11 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02708 Trre-Chr1 22380216 22381033 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02708 62 178 Nodulin-like Gene Family AT5G07050 44.444 9.43e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02708 - - tpra:123889652 178.718