Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02700 ATGGAGAACCAACAAACACTAACTTGTTTAGAAAAGGCAACACCGTTCATAGCTATCTTGTCTTTGCAATTAGGATATGCAGTTATGGATGTTTTATCAAAGGCTGCATTAAATAATGGAATGAGCAACTATGTTTTCGTTGTGTATCGCCATGCCATAGCATTCATTGTCATAACTCTTTTTGCACTCTATTTTGAAAAGAAAGTAAGGCCGAAAATGACGATTTCAATCTTCATCAAGATAGCGGCACTCAGTTTGCTAGAGCCGGTTATTGATCAGAATTTGTATTTTTTGGGGATGAAATATACAACAGCAACTTTTGCAGCTGCCATGAGCAATGTGCTTCCTGCTATTACCTTTATATTAGCTTCAATTCTTGGGCTTGAAAAAATAAAGATAAAAAGTATACGAAGCCAAGCAAAGATATTGGGAACAATAGCTACAGTTACAGGTGCTATGGTGATGACATTAATAAAAGGGCCAATAATTGTTGAGACATTCGGAGGGAAGAGCCAAATCCATCATAGTGGGGGTACAAGTAATCAACATACAATACTTGGATCTGTATTGATCACAATAGGATGCTTTAGTTGGGCTTGTTTTTTTAACCTTCAAGCTATTACCCTTCAAGCCTACCCTGCGACACTCTCTCTTTCCTCATGGATATGCCTAATGGGCACAATTGAAGGTGCAGCTGTGGCTTCAATAATGGAATGGGGTCGTCCCTCAGTTTGGTCCATAAAATGGGACATGAGATTGTTGTCTACTCTTTATTCGGGCATATTCTGCTCAGGACTAGCTTATTACTTGCAAGGAGTAGTGATGAAAGCTAGAGGTCCAGTTTTTGTGACAACATTTAGTCCTTTATGTATGGTGATTGTTGCTATCATGGGATACTTCCTTCTTGCAGAGCAAATGTTTCTCGGAAGGGTGATAGGTGCATTTATCATTTGTTTGGGCTTGTACCTTGTTGTGTGGGGGAAAAGCAAAGATTACAATAACACATCAAATCCAATTATTGAAGAGCATGTTTTACCCACTAAGCAAACTACACGTGAAAATTGTAGTCATGAGACCATCATGATTCAATGA 1092 0.3864 MENQQTLTCLEKATPFIAILSLQLGYAVMDVLSKAALNNGMSNYVFVVYRHAIAFIVITLFALYFEKKVRPKMTISIFIKIAALSLLEPVIDQNLYFLGMKYTTATFAAAMSNVLPAITFILASILGLEKIKIKSIRSQAKILGTIATVTGAMVMTLIKGPIIVETFGGKSQIHHSGGTSNQHTILGSVLITIGCFSWACFFNLQAITLQAYPATLSLSSWICLMGTIEGAAVASIMEWGRPSVWSIKWDMRLLSTLYSGIFCSGLAYYLQGVVMKARGPVFVTTFSPLCMVIVAIMGYFLLAEQMFLGRVIGAFIICLGLYLVVWGKSKDYNNTSNPIIEEHVLPTKQTTRENCSHETIMIQ 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02700 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Trre1g02700 363 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020
Trre1g02700 363 Pfam EamA-like transporter family 17 154 IPR000620 GO:0016020
Trre1g02700 363 PANTHER WAT1-RELATED PROTEIN 14 332 IPR030184 GO:0016020|GO:0022857
Trre1g02700 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02700 Trre-Chr1 22287975 22292093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02700 1 363 Nodulin-like Gene Family AT2G37460 61.580 8.91e-167 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02700 - - gmx:100811147 498.434