Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02695 ATGGGAAAGAGTTCTGGGAATTTGAATGATGGTGATGATATGACATATGATAATTCTTCTAGAATCGAGTCAAAGCGTACTAATCAGTGGTTCATGGATAGCCCTGAAGTGGATCTGGTTCCCAATAAGAAACAAGCAGTAGAGGCTCCAAACAGTTTATCGTCAGGAATGCTCAACTCCAATATTTCGTCGTGGGGAAATTCTTTAACTGGCAATTTTACTGCACAACTATTTGATCCAGCTGCTGCATCTATGAATTTTGAAGACACAAACATTTTCCCTTTATACATAGATAATAAGTTGACTGCGGAGGAAAAGGATATCTTGGATCCTTTTGGGGGTGATGCCTCATTTGGTTTATCCATGTCAACTACATTAGAAGATTCTCAACTAGTTTTTAACCATGACGGTATTAGAAAAGTCAAAGTTAATGAGGTGAAGGAGTCTGAGAATTTCATGTCTGTTCCAACTAATAATCCCTATGATGGAGGAGTTAGCAACACCGTGTCAAACACTCATGCATTCAAGGAAGGCGATCATTCAATATCAACAAGTCTCACATACAACAAAGGGGATGCCAATGTAATATTGGTGGATGGCGTTTTTGACAGGACAAATAACAATTTAATGTCAATGAGTCAATCTTATAATGAGGGAGATGGCAACTTATCAATACCTTCAACATACAAAGATATTGGTAATTCAATATCAATGGATCAAGGATACAGTCATGTAGATAGTAATGTCATGTCTATTGCTCAAGCTAACAACAAGACCGATTGTAATTCTATGTTAGGTAACCACTTATTCAATAAGGTTGAAGATGGCACCATATCAATGGGTCACACTTACCATCAGAGGGGAAATGACATGCCATTTGTTGCTCATTCTTATAATAAAGGTGGAAGCACTATAATATCCTTTGGTGGCTGTGACGATGACGATAACGATGTAACTCCAGCTGACTTATTTGTTTGCGACTACGGACTGTTTATGGGTCAAGCACCTTTGTGTATGTCGCATATGTCACAAGTTGCGAATGAAAAAGAGTTGGTTAGATCAAGCACTAAACTACTTTCAATTACAGCTCAAACATCTGCATCTGAAACTGAAAATGTTACCAAGACAAAAGAGGAGATGAAAATGTGTAAAAAGGCTACTTCAAATAACTTCCCTTCAAACGTTAGAAGTTTGCTATCCACTGGTATGCTGGATGGCGTTTCTGTCAAGTATAAGGCATGGTCACGGGAGAAGGAACTTCGAGCTGTTATAAAAGGTGCTGGGTATTTGTGCAGCTGTCCGTCGTGTAGTTTTTCTAAGGTTATTAATGCATTCGAGTTTGAACGGCATGCTGGTTGCAAGACAAAGCACCCAAATAATCATATTTACTTTGAGAATGGGAAAACCATATATGGAGTGGTACAAGAGCTGAGGAGCACTCCACCGAATATGTTATTTGAAGTTATTCAAACAATAACTGGTTCACCTATCAATCAGAAATCCTTCCGCATCTGGAAAGAATCCTTTTTGGCTGCAGCACGCGAGCTCCAGCGCATATGTGGAAAAGATGAAGTAAAACAGTTGTTATAA 1590 0.3874 MGKSSGNLNDGDDMTYDNSSRIESKRTNQWFMDSPEVDLVPNKKQAVEAPNSLSSGMLNSNISSWGNSLTGNFTAQLFDPAAASMNFEDTNIFPLYIDNKLTAEEKDILDPFGGDASFGLSMSTTLEDSQLVFNHDGIRKVKVNEVKESENFMSVPTNNPYDGGVSNTVSNTHAFKEGDHSISTSLTYNKGDANVILVDGVFDRTNNNLMSMSQSYNEGDGNLSIPSTYKDIGNSISMDQGYSHVDSNVMSIAQANNKTDCNSMLGNHLFNKVEDGTISMGHTYHQRGNDMPFVAHSYNKGGSTIISFGGCDDDDNDVTPADLFVCDYGLFMGQAPLCMSHMSQVANEKELVRSSTKLLSITAQTSASETENVTKTKEEMKMCKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRAVIKGAGYLCSCPSCSFSKVINAFEFERHAGCKTKHPNNHIYFENGKTIYGVVQELRSTPPNMLFEVIQTITGSPINQKSFRIWKESFLAAARELQRICGKDEVKQLL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02695 529 PANTHER AUTOIMMUNE REGULATOR 4 473 - -
Trre1g02695 529 Pfam Tify domain binding domain 423 477 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02695 Trre-Chr1 22257212 22259339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02695 358 509 PHD Transcription Factor Family AT3G53680 51.974 4.72e-45 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02695 - - mtr:25484103 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02695 1 22257212 22259339 Trre1g02695 1 22257212 22259339 ECH
Trre1g02695 1 22257212 22259339 Trre13g00499 13 3924123 3926874 ECH