Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02694 ATGAAGATTGCGATAAACAACGGCATAAGCAATTATGTTTTCGTTGTTTATCGCAACGGAATTGCATCAGTTCTCCTTGCTCCGATTGCACTTTATGTTGATAGGAATGTAAGGCCAGCAATGACGTTTCGTAGATTCGGGACGATACTCTTCCTCAGTTTCCTAGGGATCACTTTAGACCAGAATCTGTATTTTGCCGGGATGAAGCTTACCACGCCGACCTTTGCGGCTGCAATGTCCAATACGATCCCTACCATCACCTTTCTTTTGGCTGTTATTTTCGGAATGGAAAATATAAATATAAGAAATAGATCAAGCCAAGCAAAGGTGGTGGGCACAATGGTGACTCTAGCAGGCGCAACTATTATGACACTGATTAAAGGCCCCGTGTTGTATGGGGGTCTTCAAGCCAATAGCCACCATCGTCATGGGGGAGGTCATTATGTGCGTGGAACAGTATGGATTCTGTCCGGATGTTTATCCTCTGCTGGTTCTACAGTCTTCAGCAGATATGCCTCCGACACATACCCTCAACTCTCTCTCACTTTATTAGTGTGTGTATGTGGAACTATTGAAGGCATATTTGTAGCTCTGCTTATGGAGGATCAATTTCATTCTACCGTGTGGTTGTACTTTAAATGGGATATGATATTACTGACGGCTGTTTATGCGGGTATAGCTTGCTCCGGAGTGAGTTTCTATTTGCGACTTAAAGTGGTCCAAGCTAGAGGCCCCACTTTTGCAACAGCTTTCAGCCCGATATGTATGGTCATGGTTACCGTGGCCAGCATCATCATATTCGGCGACCTACTCACACTTGGAAGTGTGATAGGCTCGGTTATCATTTCATTCGGTCTCCTATGTCTTCTATGGGGAAGTAGGCCAGCTGAAGAGGCCAGATGA 903 0.4496 MKIAINNGISNYVFVVYRNGIASVLLAPIALYVDRNVRPAMTFRRFGTILFLSFLGITLDQNLYFAGMKLTTPTFAAAMSNTIPTITFLLAVIFGMENINIRNRSSQAKVVGTMVTLAGATIMTLIKGPVLYGGLQANSHHRHGGGHYVRGTVWILSGCLSSAGSTVFSRYASDTYPQLSLTLLVCVCGTIEGIFVALLMEDQFHSTVWLYFKWDMILLTAVYAGIACSGVSFYLRLKVVQARGPTFATAFSPICMVMVTVASIIIFGDLLTLGSVIGSVIISFGLLCLLWGSRPAEEAR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02694 300 SUPERFAMILY Multidrug resistance efflux transporter EmrE 17 125 - -
Trre1g02694 300 SUPERFAMILY Multidrug resistance efflux transporter EmrE 207 295 - -
Trre1g02694 300 PANTHER WAT1-RELATED PROTEIN 2 294 IPR030184 GO:0016020|GO:0022857
Trre1g02694 300 Pfam EamA-like transporter family 8 123 IPR000620 GO:0016020
Trre1g02694 300 Pfam EamA-like transporter family 150 290 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02694 Trre-Chr1 22252601 22255645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02694 2 293 Nodulin-like Gene Family AT2G37460 46.128 3.03e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02694 - - tpra:123915027 395.201