Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02682 ATGGACAAAATCAAATCTCACCGAACCAACTCCAAACTTCATCTTCCTCAAGGGAAAGATCAGATTCATAAACAGCGACAACATCCGGATTTATCTCCTGATTCTAGTTCTTCCAGTGGTGGGGTTGCAGACAAAGATTCGTTCTCATTTAAATTTGGGTGGAAATCTTCTAAACAATCAGTTGGAACTCCGATAAAGAAGTTATTAGCCGAAGAGATGTCACCGATGACTGAATCCAAGAGAAGATCCCCTGGTGTTATAGCTAGATTGATGGGTCTTGATGGCCTTCCGTCACAGAAGCCTACTAATAAACAGCACAAGGATCTACAGAAGTCAACACCTTTGGAGAAAACTCTAAACAGAGGAACGGTAAATGAAGGCCGGTCGTCTAGGAGAAGCTCAAGGGATCAGGAAGAATTTAAGGATGTATTTGAGGTCTCAGAGGTCCCGAAGGTAGAGAGCGGCAGGTATTCATCTTCAAACTTGAAGAAGGTCAATGAAGATGAAATGTCATTTATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCGACTTATCAGGATTTTCAGTCTTCAAAGGATTTCCATGACACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAGTACTTGAAGCGGCCAGATTCTTTGTTTAAAAAGCATTTGAATGATCTGCAAGATACCCCTTTCCAATCACATTCCAGTCATGTAGAATCAACTAATATGGAGAACTTTGAACATGATTTCAATTGGAGGTCAGATAGGGAGACAACTCAGGTGAATTACAATAGGTTTCATCAGAAGCAGCGTGCTGGTTATCATGGCCAAGTTGACAAAAGACGCGTAATGCATAATTCACCAAGATCATCAAAGCACCAGTTTAAGGGTAGTCACGAACAAGGTGCAGTCCCAACAAAGATTGTTGTCCTAAAGCCAAATCTTGGAAAATTGCAGAATGGTACCAGAATTGAATCATCACCTTGTTCTCCGCGTAGTTTTATGTCAGAACATGGAAATCATGCTGAATTTCCAGATGTCAGATTTAGAGATACTGAAATGTATCAAAAAATAAATTTGCCTGACAATGCCAGGTCTTTTAGGCACAATTCTTTAGAATCTAGAGAGATTGCAAAGGAAGTAACTAGGCAAATGAAAAACAGTTTGAGCAATGGTTACACAATGTCTTCCTCTTCTAGATTTAAAGGATACACTAGAAATGATAGTTCAAGCAGTGTTTCTGGGAATGAATCTCCAGAGGAAATAACAGCAACTTCGGGTGACCCGTTTGATTTAAATAAACGTAGCAGACGGTCACCGCGTTCTAGTGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAGATGGCACACAAGTCTCAAGAGGTGCAAGGCACCAGCAGGAGCAGCACACTGGGTGATATGCTAGCATTCCCTGGTAAGAGAATGAAGGGTACACGTTTTGACGGCACGGCTACTACTGGGGAAGGTTTTTACGATAAGTTTGCTCGCAACGGTGAACCTTCTGAGTGGGTTGAACCACTGGGTATCAGCAGCAAGGATGGTTGGAGGGATGCAAGCATTGGAAGTTTGTCGAGGTCAAAATCTCTTCCTGCTTCTTCTACTGTCTTTGGAAATCCTAGAACATACTTGTGTGCCGAAGCACTTCGTAATGATCGATATATGGTGCCAAAGGACCTTAAAAGGGAGAGGAGAAGAGCGACAAAGACTCTTGATCATAGACATGGCATGACTTCTAGAAGCACAATATCTGGTCACAAGAAGTCTTGGTCTTTGCTTTCATCGAAGCAGGAAGTTAGCGAGTTCTCTCCAGATTTAAATGCAGTTCAAAATAACATAAAGATCAATCTTGAAGAAGATTCACCCAATCTAGAGGTTCTGGCTCCTGAAGCCTTTGATCAGCCCCTTAAAGATACAAGTGCTGTTAATGATGATATTGCGGATGCAGCAAATGAAAACTCTGAACCTTCTTCAGATAAGGTGCTTCCTGGATCATCGTCTTGTGTCTTGATAAAAGGCGACATAAGTGTTGTTGACAAAGCCAATCCAATGCAAGAGAACATATCAGCTGGTTCTACTGGTGATATTTCAGTCCTCCCTGAAGCACCTGTGCCTGGACTTGAATCTTCATGTTGTAAAGATGCTGATCAGCCCAGTCCAATCTCAGTTTTAGATCCTTCTTTTACAGATGATCTGTCATCTTGTTCTGAATGTTTTGGAAGTGTCAGTGCTGACCTACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGAACAAGTGGAGGGACCTATGCTAATTTCAAGTGATGAAGATGGCGGGGAAGCATCTGTTGGAATGTTAGAAGGCAATGCATTATGGAGAGCTGCAGATAGCTGGGAGTCTTCCTACATTATTGATGTCTTGTCTGAATCTGCTATTGTTGAGGCTCAAACTGACAATATTTTGGAAGTTTGGCATTCTCTAGAAAGCCCTGTGAGTCTGTCTGTGTTTGAAGATCTCGAAGAGAAGTACGATGATTGGACTACTTGCTCAAGGTCTGAAAGAAGATTGCTTTTCGACCGCATCAATTCAGGAATTGTCAAGATTCATGAGCAATCTTCTAATCCACAACCATGGATGGGAAATGCAGCTCTAAGTTTTGGATCAAAAAGGATTAATGGTCTTAAAGATGGTCTTTTCCAGATGCTAGGGAGCCAAGGAAAGGTAGAGGATGATGTCCTGGGTAAGTTGCTGATTGTGGAGTCTCAATGGTTGAAACTGAGAGATGACATTGATGTAATAGGCAGAGAAGTTGAGAGATTGATATTAGATGATATAGTAGCAGAAATAGTCAGTATGTAG 2892 0.4174 MDKIKSHRTNSKLHLPQGKDQIHKQRQHPDLSPDSSSSSGGVADKDSFSFKFGWKSSKQSVGTPIKKLLAEEMSPMTESKRRSPGVIARLMGLDGLPSQKPTNKQHKDLQKSTPLEKTLNRGTVNEGRSSRRSSRDQEEFKDVFEVSEVPKVESGRYSSSNLKKVNEDEMSFIEQKFMDAKRLATYQDFQSSKDFHDTLEVLDSNKDLLLKYLKRPDSLFKKHLNDLQDTPFQSHSSHVESTNMENFEHDFNWRSDRETTQVNYNRFHQKQRAGYHGQVDKRRVMHNSPRSSKHQFKGSHEQGAVPTKIVVLKPNLGKLQNGTRIESSPCSPRSFMSEHGNHAEFPDVRFRDTEMYQKINLPDNARSFRHNSLESREIAKEVTRQMKNSLSNGYTMSSSSRFKGYTRNDSSSSVSGNESPEEITATSGDPFDLNKRSRRSPRSSESSVSREAKKRLSERWKMAHKSQEVQGTSRSSTLGDMLAFPGKRMKGTRFDGTATTGEGFYDKFARNGEPSEWVEPLGISSKDGWRDASIGSLSRSKSLPASSTVFGNPRTYLCAEALRNDRYMVPKDLKRERRRATKTLDHRHGMTSRSTISGHKKSWSLLSSKQEVSEFSPDLNAVQNNIKINLEEDSPNLEVLAPEAFDQPLKDTSAVNDDIADAANENSEPSSDKVLPGSSSCVLIKGDISVVDKANPMQENISAGSTGDISVLPEAPVPGLESSCCKDADQPSPISVLDPSFTDDLSSCSECFGSVSADLQGLRMQLQLLKLESEEQVEGPMLISSDEDGGEASVGMLEGNALWRAADSWESSYIIDVLSESAIVEAQTDNILEVWHSLESPVSLSVFEDLEEKYDDWTTCSRSERRLLFDRINSGIVKIHEQSSNPQPWMGNAALSFGSKRINGLKDGLFQMLGSQGKVEDDVLGKLLIVESQWLKLRDDIDVIGREVERLILDDIVAEIVSM 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02682 963 MobiDBLite consensus disorder prediction 1 43 - -
Trre1g02682 963 MobiDBLite consensus disorder prediction 385 480 - -
Trre1g02682 963 MobiDBLite consensus disorder prediction 432 465 - -
Trre1g02682 963 MobiDBLite consensus disorder prediction 70 140 - -
Trre1g02682 963 MobiDBLite consensus disorder prediction 320 339 - -
Trre1g02682 963 PANTHER AFADIN 22 962 - -
Trre1g02682 963 Pfam Domain of unknown function (DUF4378) 811 959 IPR025486 -
Trre1g02682 963 MobiDBLite consensus disorder prediction 1 30 - -
Trre1g02682 963 MobiDBLite consensus disorder prediction 320 335 - -
Trre1g02682 963 Pfam Protein of unknown function (DUF3741) 174 218 IPR022212 -
Trre1g02682 963 MobiDBLite consensus disorder prediction 385 424 - -
Trre1g02682 963 Pfam DUF761-associated sequence motif 79 100 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02682 Trre-Chr1 22109553 22114340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02682 61 961 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 37.177 2.09e-138 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02682 - - ccaj:109788117 1164.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02682 1 22109553 22114340 Trre1g02682 1 22109553 22114340 ECH