Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02650 ATGGAACCTTTCTTTCTCTCCACTCTCTCATTCATCCTCTTACTTTTCTTCCCTTTTTCCTCTTCTCAGATGCCAGGTTTTGTAAGTTTGGACTGTGGAGGTGATAAAAATTTCACTGATGAAATTGGTCTTAAATGGACTCCTGATGATAAGATTACTTATGGAGAAATAAGTACTATTTCTGTTGCCAACGAGACACGGAAGCAATACACGACACTTCGACACTTTCCTGCCGATTCCAGAAAATACTGCTACACACTTGATGTTGTCAGTAGGACAAGGTATCTACTGAGGGCAACATTCTTGTATGGAAACTTTGATAACAACAATGTTTACCCGAAATTTGACATTTCTATTGGGGCTACTGATTGGTCTACTATTGTTATATCGGATGCAAACACTATAGAAGTAAGAGAAATTATATTTTTGGCTTCAAGTCCTACTGTTAGTGTATGTCTATCCAATGCAACAACTGGCCAGCCATTCATATCTACACTTGAACTTAGGCAATTCAACGGTTCGGTTTATTATACATTCTTTGAGGAAGACTTTTACCTCAGCGTTTCTGCGAGGATAAATTTTGGTGCAAAGAGTGATTCCCCGGTTAGGTATCCTGATGACCCGTTTGATAGAATTTGGGAGTCAGATTCTGTGAAGAAAGCAAATTACCTCGTTGATGTTGCTGATGGAACCAAGAAAATTTCCACCAATGTATCAATTGATATTAACAGAGATGAAATGCCACCAGTGAAAGTAATGCAGACAGCCGTAGTAGGTACAAATGGATCTCTAACATACCGGTTGAACTTGGATGGTTTTCCTGCTATGGGCCGGGCATTCAGCTATCTTGCAGAGATAGAAGATTTGCCGCATAATGAATCTCGAAAGTTCAGGCTAGTACTTCCAGGCCAGACTGAAATTAGTAAGGCCGTGGTAAATATCGAAGAGAATGCTCTAGGAAAATATCGTGTTTATGAACCGGGAATTAACAATGTGTCCCTACCCTTTGTGATGTCCTTTAAATTAGCAAAGACATCTGACTCTTCCAAGGGTCCTCTTCTCAATGCCATGGAGATTAGTAAGTATCTAGAGAAAAATGATGGCTCTCCTGATGGAGAAGCTATATCTAGTGTACTTTCTCACTACTCGTCGGGAGATTGGGCACAAGAAGGGGGTGATCCATGTTTACCTGTTCCATGGTCGTGGGTCCGATGTAGCTCAGATCAACAGCCAAGAATAGTTTCAATTTTGTTGTCTGGGAAAAACATGACGGGCGATATTCCTTTGGACATCACCAAATTGACTGGTCTGGTTGAACTATGGCTTGATGGAAATATGCTGACAGGCCCAATACCAGATTTCACCGGATGCATGGACTTAAAGATCATTCATCTTGAGAACAATCAGTTGGCAGGTGCGCTCCCAGCCTCTTTGGGGAGCCTTCCAAATTTGAAGGAACTGTATGTCCAGAACAATATGTTATCTGGAACCGTACCGTCAGAACTTTTGAGCAAATATTTGCTGTTTAACTACTCCGGAAACATCGGTCTTAATAAAGGAAGCAGAAAAAACAATCAATTGTATGTCATTATTGGTTCAGCAGTTGGGGCCGCCATTTTACTTTTGGCTACTATTATATCATGTTTGTGTATGCATAAAGGAAAGATAAAATACTATGATCAAGACCACCTTGTTTCACTCTCTACTCAAAACCTGGAATCTAAGAGTGATGGCCATGCAGAAGTTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAGCTCCACAAATAATTTTGAGAAGAAAATTGGATCTGGAGGTTTTGGAGTTGTTTATTATGGGAAACAGAAAGATGGAAGAGAGATAGCAGTTAAAGTTTTAACTAGTAATTCATATCAAGGCAAAAAAGAGTTCTCAAATGAGGTGACTCTTCTGTCAAGGATACATCATAGAAACTTGGTACAGCTTCTAGGTTATTGCCGAGAAGAAGGGAATAGTATTCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTTTATGGTCCATTAACACACGGACGGAGTATCAATTGGATTAAGCGACTTGAGATCGCCGAAGATTCTGCCAAAGGGATTGAGTATCTTCACACAGGATGTGTCCCAGCAGTTATCCATAGAGACCTAAAGAGCAGCAACATTCTTCTTGACAGGCACATGAGAGCTAAGGTTTCAGATTTTGGGCTTTCGAAACTCGCTGTTGATGGAGCCTCTCACGTCTCTAGCATAGTTCGGGGTACAGTAGGATATCTGGATCCTGAGTACTATATTTCTCAGCAGCTAACGGACAAGAGCGATATTTATAGTTTTGGGGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCTAATGACAGCTTTGGTGCTAATTGCAGAAACATAGTCCAATGGGCAAAAATGCACATTGAGAGTGGTGATATACAAGGCATAATAGATCCAGCATTACACGGAGACTATGATCTACAATCGATGTGGAAAATAGCAGAGAAAGCGTTGATGTGCGTTCAACCACATGGACACATGCGGCCATCAATATCAGAAGTTGTGAAAGAAATTCAAGATGCAATTGCTATTGAAAGAGAGGCGGAAAGCATCTCGGAGGATGAGAATATGACGAGAAATTCAGTTCACTCTTCCATCAACATGGGTTCTATGGATCTCGCTGCAGCAGAGAATTACCTCGCTATTGATGATTCCATTGCACGCCCCACAGCACGATAG 2769 0.407 MEPFFLSTLSFILLLFFPFSSSQMPGFVSLDCGGDKNFTDEIGLKWTPDDKITYGEISTISVANETRKQYTTLRHFPADSRKYCYTLDVVSRTRYLLRATFLYGNFDNNNVYPKFDISIGATDWSTIVISDANTIEVREIIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTFFEEDFYLSVSARINFGAKSDSPVRYPDDPFDRIWESDSVKKANYLVDVADGTKKISTNVSIDINRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPAMGRAFSYLAEIEDLPHNESRKFRLVLPGQTEISKAVVNIEENALGKYRVYEPGINNVSLPFVMSFKLAKTSDSSKGPLLNAMEISKYLEKNDGSPDGEAISSVLSHYSSGDWAQEGGDPCLPVPWSWVRCSSDQQPRIVSILLSGKNMTGDIPLDITKLTGLVELWLDGNMLTGPIPDFTGCMDLKIIHLENNQLAGALPASLGSLPNLKELYVQNNMLSGTVPSELLSKYLLFNYSGNIGLNKGSRKNNQLYVIIGSAVGAAILLLATIISCLCMHKGKIKYYDQDHLVSLSTQNLESKSDGHAEVAHCFSFSEIESSTNNFEKKIGSGGFGVVYYGKQKDGREIAVKVLTSNSYQGKKEFSNEVTLLSRIHHRNLVQLLGYCREEGNSILIYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDRHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKMHIESGDIQGIIDPALHGDYDLQSMWKIAEKALMCVQPHGHMRPSISEVVKEIQDAIAIEREAESISEDENMTRNSVHSSINMGSMDLAAAENYLAIDDSIARPTAR 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02650 922 PANTHER OS07G0107800 PROTEIN-RELATED 460 872 - -
Trre1g02650 922 FunFam Leucine-rich repeat receptor-like protein kinase 571 671 - -
Trre1g02650 922 ProSiteProfiles Protein kinase domain profile. 596 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g02650 922 CDD STKc_IRAK 602 869 - -
Trre1g02650 922 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 672 881 - -
Trre1g02650 922 SUPERFAMILY Protein kinase-like (PK-like) 583 870 IPR011009 -
Trre1g02650 922 SUPERFAMILY L domain-like 398 504 - -
Trre1g02650 922 SMART serkin_6 596 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g02650 922 Pfam Protein kinase domain 598 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g02650 922 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Trre1g02650 922 Gene3D Ribonuclease Inhibitor 373 527 IPR032675 -
Trre1g02650 922 FunFam Leucine-rich repeat protein kinase family protein 373 523 - -
Trre1g02650 922 Gene3D Transferase(Phosphotransferase) domain 1 672 896 - -
Trre1g02650 922 Gene3D Phosphorylase Kinase; domain 1 568 671 - -
Trre1g02650 922 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Trre1g02650 922 Pfam Malectin-like domain 30 361 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02650 Trre-Chr1 21801420 21806728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02650 17 706 Receptor kinase-like Gene Family AT2G37050 66.905 0.0 978
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre1g02650 Malectin_like 2.5e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02650 - - gmx:100798007 1556.58