Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02626 ATGGCTAACAAGTCTCGTTCTAATTACTCTTTCCTTTTTCTATTGATTCTCCTACATTTTAATTTGGGGAAAAGCCAGCTACAAGTGAATTACTACTCCAACAGCTGCCCAAAAGCAGAAGAGATCATCAAGCAAAAAGTCACTGAACTATATCACTGGCATGGAGACACAGCCATTTCGTGGGTTAGAAATCTCTTCCATGATTGTGTAGTCAAGTCGTGTGATGCATCCCTTCTTTTATCGACGGTGCGCGGTGTGGTAGTATCGGAGCAGACATCCGGGAGAAGTTTTGGGATGAGAAATTTCAAGTATGTGAACACCATCAAAGCTGCTGTTGAGAAAGAATGTCCTTTGACAGTGTCATGTGCTGATATTGTTGCACTTTCTGCTAGAGACGGCATTACTATGTTGGGAGGTCCAAACATTGAAATGAAGACAGGAAGAAAGGATAGCAAAGAAAGTTATTCAACGGTGGTGGAAGAATTCATTCCAAACCATAATGACTCCATATCATTAGTGCTCTCTCGTTTTCAAGCCGTTGGCGTTGACGTTGAAGCAACCGTTGCTCTTTTAGGAGCACACTCAGTGGGAAGAGTCCACTGCATGAATTTGGTCCATAGACTATACCCTACAGTGGACCCAACACTAAACCCAACACATGCTGCATACCTAAAACGTAGGTGCCCAACACCATATCCAGATCCAAAAGCTGTCCAATATGTGAGAAATGATCTAAAAACACCTATGATAATTGACAACAACTACTACAAGAACATTTTGCAACATAAGGGTCTTCTCACTATTGATGAAGAACTAGCCACTGATCCAATAACAGCACCTTATGTACAAAAAATGGCAGAGGATAATGGTTACTTCAATGAACAATTCTCAAGGGCTGTTCTTTTGTTGTCTGAGAATAATCCTCTTATTGGAGATGATCAAGGTGAAATTAGAAAAGATTGTCGCTTTGTCAATGCCAAATAG 984 0.4085 MANKSRSNYSFLFLLILLHFNLGKSQLQVNYYSNSCPKAEEIIKQKVTELYHWHGDTAISWVRNLFHDCVVKSCDASLLLSTVRGVVVSEQTSGRSFGMRNFKYVNTIKAAVEKECPLTVSCADIVALSARDGITMLGGPNIEMKTGRKDSKESYSTVVEEFIPNHNDSISLVLSRFQAVGVDVEATVALLGAHSVGRVHCMNLVHRLYPTVDPTLNPTHAAYLKRRCPTPYPDPKAVQYVRNDLKTPMIIDNNYYKNILQHKGLLTIDEELATDPITAPYVQKMAEDNGYFNEQFSRAVLLLSENNPLIGDDQGEIRKDCRFVNAK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02626 327 Gene3D - 30 325 - -
Trre1g02626 327 Gene3D Peroxidase, domain 2 164 303 - -
Trre1g02626 327 ProSiteProfiles Plant heme peroxidase family profile. 26 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PANTHER - 12 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 FunFam Peroxidase 164 303 - -
Trre1g02626 327 CDD secretory_peroxidase 26 324 IPR033905 GO:0004601|GO:0042744
Trre1g02626 327 SUPERFAMILY Heme-dependent peroxidases 26 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 FunFam Peroxidase 30 172 - -
Trre1g02626 327 Pfam Peroxidase 44 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g02626 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02626 Trre-Chr1 21591344 21594315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02626 29 325 Peroxidase AT2G37130 74.497 4.90e-167 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02626 K00430 - gmx:100811277 537.339