Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02609 ATGGCATCCAACAGCAACAGGGGTCAAGGAGGAATTCAACAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTGAATGCTGCAAAGAATGAAAAATCGGCTAGGTTGAAACAGGCCAAAGAAGAGGCTGAAAAGGAGATTGCTGAATACCGGGCTAAGCTTGAGGCTGAGTTTCAAAAGAAAGTGTCAGATAGTAGTGGTGATTCTGGAGCTAATGTCAAGCGACTTGACCAAGAAACCGAAGAAAAAATCCATCACCTGAAAACAGAGGCTGCAAGAATATCAGATGATGTTGTTGCCATGCTCCTGAAGTATGTAACAACTGTGAAAAAATAG 339 0.4307 MASNSNRGQGGIQQLLAAEQEAQRIVNAAKNEKSARLKQAKEEAEKEIAEYRAKLEAEFQKKVSDSSGDSGANVKRLDQETEEKIHHLKTEAARISDDVVAMLLKYVTTVKK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02609 112 Pfam Vacuolar (H+)-ATPase G subunit 9 111 IPR005124 GO:0016471|GO:0046961|GO:1902600
Trre1g02609 112 Coils Coil 12 61 - -
Trre1g02609 112 FunFam V-type proton ATPase subunit G 5 112 - -
Trre1g02609 112 Gene3D - 2 112 - -
Trre1g02609 112 NCBIfam V-type ATPase subunit G 9 111 IPR005124 GO:0016471|GO:0046961|GO:1902600
Trre1g02609 112 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 5 112 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02609 Trre-Chr1 21356073 21357759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02609 5 111 Primary Pumps ATPases(2) AT3G01390 74.766 1.60e-42 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02609 K02152 - gmx:100306550 186.808