Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02590 ATGAAATCAAGATTTTTGAAAGGGTGTATTAACAAATGCAAGAAAGTGGGAAGTATAGTAAAAACTTGTGCTACTTGTGAAGATTGTTGTGAAAGGAGTTTATGGTCTTCTCTTCATGAAAGTAACTCCATACCAAGTGATGTTCCAAAAGGTCACATGGTTGTATACATAGGTGAGAATCACAAGAGATATGTTATTAAAATTGCATTGCTTCATCATCCACTTTTCAAAGCCTTGTTGGATCAAGCTCAAGAAGAATATGATTTCATTGCTGATTCAAAACTATGTATTCCTTGTGATGAACATCTTTTCCTAAGTGTCCTTCGTTGTGCTAGTTCTCCACAGAATCAAAGGGTGTGTTTGTGTCTCTGA 372 0.3548 MKSRFLKGCINKCKKVGSIVKTCATCEDCCERSLWSSLHESNSIPSDVPKGHMVVYIGENHKRYVIKIALLHHPLFKALLDQAQEEYDFIADSKLCIPCDEHLFLSVLRCASSPQNQRVCLCL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02590 123 Pfam Auxin responsive protein 37 110 IPR003676 GO:0009733
Trre1g02590 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02590 Trre-Chr1 21116803 21117174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02590 10 118 Calmodulin-binding Proteins AT4G34750 40.351 7.83e-23 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02590 K14488 - gmx:102662255 219.55