Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02585 ATGATGAACTCTGTTTCCTTAATTCCTCTCTTGTTCTTCTTCTCATTCACTCTTTTACCTACAATTCATTCTGCCGAAACTTTTGCCCCTTCCTTTTACACCGATGAAATCTACAAGGAACTTCAGAATATCGCTGTTCTTTTGAATAAGGATATTAAATCAAGTTTAGGTTTCTGCATTAAGGATCCGAAAAAAGATTGGGAGGAAGCTTTTGATTTTACAGGAAAGTTGGATTTTGTCGATTCTTGTGTTAAGAAAAAAGGAGATTTCAGGGATCGGATATGTACTGCAGCTGAAATAAGGTACTACTTCCATGGTTTCGTGGCACAGGGAGCATCATCCGACAATTATGTAGAACCTAACAAGAATTGCAATTTGACCTCGTGGGTTGATGGTTGTGAACCTGGATGGGGTTGTAGTACGGGCAATAATATTGACCTAAAAAAGGATATAAAGGAAATTCCAAAGAGAACCAAAAACTGTCAACCTTGTTGCGAGGGTTTTTTTTGTCCTCAAGGACTAACTTGTATGATACCCTGCCCACTAGGTTCTTATTGTCCACTTGCAAAACTGAACAGCCAGACTGGACTATGTGAACCATATAGTTACCAGATACCACAGGGAGAACCAAAGCATACTTGTGGCGGTGCTGATATTTGGTCTGGTGTGGTAAACAGTAGTGATATATTCTGTTCTCCCGGATCATACTGCCCAACTACAACACGTAAAGTTTCTTGCGATCGTGGATATTACTGTAGGATGGGTTCTACTCATCAGAACCTATGCTCCAAGTTCAGCCAATGTAATCCAAACACCGCAACCCAAAATATGCATGCTTATGGCGCGCTGCTTATTGTTGCATTGAGTACTGTCCTGATCATCATTTATAACTGTTCTGATCAAGTTCTTGCTACACGAGAAAGAAGGAAAGCTAAATCCAGAGAAGCTGCAGCAAGACAGGTAAGAGAAACCGTACAAGCTCGAGAAAGGTGGAAGATGGCAAAAGACGCTGCTAAAAGAAATAAGATGGGATTGCAAGATCAGCTAGTACGCACTTTTTCTCGCAAAAAATCAGTAAAGCAAGGGGAGCAAGCTAATCCTGCTATACCTCCAGAACAGTCATCTGCAGCCACAAAGGAACCTAGCAAACTTACTAAAATGATGAATTCCTTTGAGAATGACCCTGCTAGTAATGAAGGATTCAATCTAAAAATTGGGGACAAAAATATTAAAAAGCAGATGCCAAAGGGAAAACAGTTACATACACAAAGCCAAATTTTAAGGTATGCTTATGGTCAGATTGAGAAAGAGAAAGCTCAACAAGAGAAACAAAATAACTTGACCTTCTCAGGAGTTATTTCAATGGCCGCTGAAGGTGAAGAGGTTAGATCAAGGCCTGAGATCGAGGTAGCTTTCAAAGATTTAACTCTTACTTTGAAAGGCAAAAGAAAACATGTACTCAGGTGCGTGACTGGTAAAATCATGCCTGGTCGAGTTTCAGCTGTGATGGGTCCCTCAGGAGCTGGAAAAACTACATTTCTTTCTGCCCTGGTAGGGAAAATAAGAGGGTGCACTGTGACAGGCTCAATTCTAGTAAATGGAAAACCTGAATCCATTCACTGTTATCAGAAAATTATTGGATATGTGCCACAAGATGATATTGTGCATGGGAACTTGACAGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTATCTGATGACATGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAAACCTTGGGACTCCAGGCAATAAGAGATTCCCTTGTTGGGACAGTAGAGAGGCGAGGCATATCTGGTGGGCAACGAAAACGTGTAAATGTAGGGTTGGAGATGGTTATGGAGCCTTCATTGTTAATCTTAGATGAGCCTACAACTGGTCTAGACAGTGCATCTTCGACTTTGCTGCTGAAAGCACTTCGCCGTGAAGCTGCTGAAGGGGTAAACATCTGCATGGTGCTTCACCAACCTAGCTATACTTTATTCAGAATGTTCGATGATATAATATTTCTAGCAAAAGGTGGCCTCATTGCATATCACGGTCCTGTAAAAAAAGTAGAAGAATACTTTGCTGGCATTGGTATCCCTGTTCCTGATCGTGTGAATCCTCCAGATCATTTTATTGACATTCTAGAAGGTTTAGTGAAACCACCAAGTGAAAGTGTGACTTATCAACAACTACCTGTCAGATGGATGCTACATAATGGTTACCCAGTACCACCAGATATGCTTCATTATGCTGATGAAATTTCTGCTTCATCATCTTCCTCAAATGCAAATCATGCAACAAAGGGTGCTGATGAAGCTTCTGATCAATCATTTGCTGGAGAGTTTTGGGAGGATATGAAAAGTAATGTACAGTTGCACAAAGATCATATCGAGGCAACCTTCTTAGCAACTAAGGACTTATCTGGCCGAAGAACTCCTGGCGTAGCTCGGCAGTATAGATACTACGTTGGGCGGGTTGGTAAGCAGCAGCTGCGAGAAGCAAAATCACAAGCAGTTGACTATCTCCTTTTATTAGTTGCTGGGGCTATCTTGGGAACTCTTACTAAAGTAAATGATGAAACATTTGGGTCTCTTGGATATACATATACTGTCATTGCTGTTTCTCTACTTTGCAAGATTGCAGCTCTGAGATCATTTTCTATGGATAAATTACAATACTGGAGGGAGAGTGCATCAGGGATCAGCAATCTGGCTCATTTTTTGTCCAAAGATACAATTGATCTTTTCAGTACACTAGTCAAACCTCTCATTTATCTATCCATGTTCTACTTTTTTAGCAATCCAAGGTCAAGCTTCGGAAGTAATTATGCGGTTTTGGTATGCCTTGTATACTGTGTGACTGGCATGGCTTACGCATTAGCAATTTATTTTGAGCCTGCTCCTGCTCAGCTGTGGGCAGTGCTTCTCCCTGTTGTTATGACTCTCATTGCAAACCAGACAAGAGATACTCTCTTTATGAAGATCCTAATAAAGTTGTGTTACCCAAATTGGGCTTTGGAGGCCTTCATTATTGCAAATGCTGAAAGGTACACTGGAGTGTGGCTAATAACTCGATGTAGTTCACTGATGAATAGCGGTTATAATGTCGGTGATTGGCCTATTTGTCTAGTTGTCCTCATTTTGTATGGTATAGTTGCCCGAATTGTGGCCTTCATTTGTCTCATGATCACCCAAAAGAAGTGA 3231 0.4095 MMNSVSLIPLLFFFSFTLLPTIHSAETFAPSFYTDEIYKELQNIAVLLNKDIKSSLGFCIKDPKKDWEEAFDFTGKLDFVDSCVKKKGDFRDRICTAAEIRYYFHGFVAQGASSDNYVEPNKNCNLTSWVDGCEPGWGCSTGNNIDLKKDIKEIPKRTKNCQPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNSQTGLCEPYSYQIPQGEPKHTCGGADIWSGVVNSSDIFCSPGSYCPTTTRKVSCDRGYYCRMGSTHQNLCSKFSQCNPNTATQNMHAYGALLIVALSTVLIIIYNCSDQVLATRERRKAKSREAAARQVRETVQARERWKMAKDAAKRNKMGLQDQLVRTFSRKKSVKQGEQANPAIPPEQSSAATKEPSKLTKMMNSFENDPASNEGFNLKIGDKNIKKQMPKGKQLHTQSQILRYAYGQIEKEKAQQEKQNNLTFSGVISMAAEGEEVRSRPEIEVAFKDLTLTLKGKRKHVLRCVTGKIMPGRVSAVMGPSGAGKTTFLSALVGKIRGCTVTGSILVNGKPESIHCYQKIIGYVPQDDIVHGNLTVEENLRFSARCRLSDDMPKPDKVLIVERVIETLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSTLLLKALRREAAEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLIAYHGPVKKVEEYFAGIGIPVPDRVNPPDHFIDILEGLVKPPSESVTYQQLPVRWMLHNGYPVPPDMLHYADEISASSSSSNANHATKGADEASDQSFAGEFWEDMKSNVQLHKDHIEATFLATKDLSGRRTPGVARQYRYYVGRVGKQQLREAKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSMDKLQYWRESASGISNLAHFLSKDTIDLFSTLVKPLIYLSMFYFFSNPRSSFGSNYAVLVCLVYCVTGMAYALAIYFEPAPAQLWAVLLPVVMTLIANQTRDTLFMKILIKLCYPNWALEAFIIANAERYTGVWLITRCSSLMNSGYNVGDWPICLVVLILYGIVARIVAFICLMITQKK 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02585 1076 MobiDBLite consensus disorder prediction 367 381 - -
Trre1g02585 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 694 IPR027417 -
Trre1g02585 1076 Coils Coil 1072 1076 - -
Trre1g02585 1076 ProSitePatterns ABC transporters family signature. 611 625 IPR017871 GO:0005524|GO:0016887
Trre1g02585 1076 MobiDBLite consensus disorder prediction 355 381 - -
Trre1g02585 1076 CDD ABCG_EPDR 468 694 - -
Trre1g02585 1076 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 436 1064 - -
Trre1g02585 1076 FunFam ABC transporter G family member 24 464 706 - -
Trre1g02585 1076 Pfam ABC-2 type transporter 668 1076 IPR043926 GO:0140359
Trre1g02585 1076 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 470 711 IPR003439 GO:0005524
Trre1g02585 1076 Pfam ABC transporter 490 638 IPR003439 GO:0005524
Trre1g02585 1076 Gene3D - 458 705 IPR027417 -
Trre1g02585 1076 SMART AAA_5 496 688 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02585 Trre-Chr1 21085275 21097635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02585 464 671 Calmodulin-binding Proteins AT2G36910 27.230 1.06e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02585 - - gmx:100812387 1836.62