Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02480 ATGGAACTTTCTCTTCTCAGCCATCAGCTCCATCCTTTGCTCCTTCATTGCCCTCTCACAACCAATTTCTTGACAAGAACACAAAAAAGAATTTACAACAAAACTTCAAATAAGTTATTACAATGCAGCTGTTCACAGTCTTCCTCCAATAATACTGTTGTAGAACCAATCACTATGACTTTACAGATTGAAGGAAGGAGAGCATTACTCACTTGTCTCCTTTCAACATTTGCGGGAGTTTATGCAGGTGATGGGGCTGAAGCTGTTAGCACTAGTAGAAGAGCTTTGAGAGGAGCCAAAATTCCTGAAAGTGATTACAAAACCTTGCCTAATGGTCTGAAGTACTACGATTTGAAGGTTGGGGATGGAGCTGAAGCTGTGAAAGGATCGCGTGTCGCAATTCACTATGTTGCTAAATGGAGGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCTTATGGATTTGATGTAGGCGAATCTAAGAGAGGAAATGTCCTAAAAGGTTTGGATGTAGGAGTAGAGGGCATGCGAGTTGGAGGCCAGCGACTGTTAATTGTTCCTCCTGAACTTGCCTATGGAAGCAGAGGAGTCCAAGAAATCCCTCCAAATGCAACAATAGAGATGGATATTGAACTGCTTGCCATCAAACAAAGCCCATTTGGGACTGCCGTAAAGATTGTTGAAGGCTAA 711 0.4304 MELSLLSHQLHPLLLHCPLTTNFLTRTQKRIYNKTSNKLLQCSCSQSSSNNTVVEPITMTLQIEGRRALLTCLLSTFAGVYAGDGAEAVSTSRRALRGAKIPESDYKTLPNGLKYYDLKVGDGAEAVKGSRVAIHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESKRGNVLKGLDVGVEGMRVGGQRLLIVPPELAYGSRGVQEIPPNATIEMDIELLAIKQSPFGTAVKIVEG 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02480 236 Gene3D - 85 230 IPR046357 GO:0003755
Trre1g02480 236 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 129 223 IPR001179 GO:0003755
Trre1g02480 236 SUPERFAMILY FKBP-like 95 223 - -
Trre1g02480 236 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 102 231 - -
Trre1g02480 236 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 125 220 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02480 Trre-Chr1 20100706 20103072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02480 118 222 Calmodulin-binding Proteins AT5G48570 30.000 1.74e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02480 - - gmx:100815603 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02480 1 20100706 20103072 Trre1g02480 1 20100706 20103072 ECH