Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02441 ATGATAATAGAGTGTTGTGTCTCTAGAAGTACAACACGTGCATGTGCCACTCTCCCTCAGACAAAATATCCATGTAACATTACAAGAAGACCTTTATCTTTGTCTATCATCTCCACCACTTTCTCTGCTTTAATCTTCTCACTTACTCCTCCACCTTCATCTTCTTCTCCATTAAATTCTTCAAAATTTCCAATAGCTGACTTTTCTGAGCTCCCCAATTCTGGTGGTGTTAAGGCTTTGGAACTCCTTGTTGGTTCTGGTGAAGTTCCTCAAGATGGGGATCAGGTTGAAATTCATTACTATGGTAGACTAGCAGCAAAACAAGGATGGCGTTTTGATTCAACCTATGATCACAAAGATGAGAATGGCGATCCTAATCCATTCGTCTTTGTTCTTGGCTCTGGAAAGGTAATTGCTGGAATTGATGTGGCAGTGAGATCGATGAAAGTAGGTGGTATTCGTAGAGTCATCATACCTCCATCACTTGGGTATCAAAACACATCACAGGAACCTCTCCCACCTAATTTTTTTGACAGGCAGAGGCTGTTCACTACCATTTTCAATCCAACTCGTCTTGCAAATGGTGAAGGCTCCACTTTAGGGACACTTATATTTGATATTGAACTGGTTGGTCTCAGGCATCAGTGA 648 0.4136 MIIECCVSRSTTRACATLPQTKYPCNITRRPLSLSIISTTFSALIFSLTPPPSSSSPLNSSKFPIADFSELPNSGGVKALELLVGSGEVPQDGDQVEIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGSGKVIAGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPLPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVGLRHQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02441 215 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 17 215 IPR044197 -
Trre1g02441 215 Gene3D - 64 212 IPR046357 GO:0003755
Trre1g02441 215 SUPERFAMILY FKBP-like 67 213 - -
Trre1g02441 215 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 93 213 IPR001179 GO:0003755
Trre1g02441 215 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 89 210 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02441 Trre-Chr1 19741624 19744513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02441 52 213 Calmodulin-binding Proteins AT5G48570 31.288 4.62e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02441 - - cam:101514460 355.91